HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.9 nTPM
HPA:51.9 nTPM
GTEx:61.8 nTPM
FANTOM5:97.4 Scaled Tags Per Million
Pig:18.2 nTPM
Mouse:107.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028943
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.9
Sample id Sample description nTPM
Hippocampus
nTPM: 49.6
1898 Male, age 80, left hemisphere 51.6
2529 Female, age 94, left hemisphere 51.0
2148 Female, age 91, left hemisphere 49.8
2621 Female, age 67, right hemisphere 49.7
1855 Male, age 76, left hemisphere 48.3
1911 Female, age 85, right hemisphere 47.4
Dentate gyrus
nTPM: 49.5
2010 Male, age 76, both hemispheres 52.3
2530 Female, age 94, left hemisphere 50.0
1927 Female, age 91, both hemispheres 49.4
2246 Female, age 85, both hemispheres 49.1
2531 Female, age 67, both hemispheres 48.1
2528 Male, age 74, both hemispheres 47.9
Entorhinal gyrus
nTPM: 48.6
2117 Female, age 91, right hemisphere 51.1
2764 Male, age 80, right hemisphere 49.0
1787 Male, age 76, left hemisphere 48.8
1938 Female, age 85, left hemisphere 48.4
2686 Male, age 75, right hemisphere 47.9
2613 Female, age 94, left hemisphere 46.8
Hippocampus, CA1
nTPM: 51.9
2749 Male, age 80, left hemisphere 59.9
1873 Female, age 85, both hemispheres 51.7
2045 Male, age 76, both hemispheres 51.6
2527 Male, age 74, both hemispheres 49.5
2082 Female, age 91, right hemisphere 46.9
Hippocampus, CA2
nTPM: 50.1
1963 Male, age 80, left hemisphere 55.4
1892 Male, age 76, both hemispheres 52.2
2249 Male, age 74, both hemispheres 49.3
1940 Female, age 85, left hemisphere 48.1
2113 Female, age 91, right hemisphere 47.9
2437 Female, age 94, left hemisphere 47.5
Hippocampus, CA3
nTPM: 50.2
2137 Male, age 80, left hemisphere 56.3
1867 Male, age 76, both hemispheres 53.8
2861 Female, age 67, both hemispheres 48.9
2436 Male, age 74, both hemispheres 47.8
1891 Female, age 85, both hemispheres 47.7
2620 Female, age 94, left hemisphere 46.9
Parahippocampal cortex
nTPM: 47.7
1850 Male, age 80, both hemispheres 49.1
1990 Female, age 91, right hemisphere 48.9
2245 Female, age 91, both hemispheres 48.5
1933 Female, age 85, both hemispheres 48.0
2018 Male, age 76, both hemispheres 48.0
2532 Female, age 72, left hemisphere 47.6
2622 Female, age 67, right hemisphere 47.1
2692 Male, age 74, both hemispheres 47.1
2250 Female, age 67, right hemisphere 46.8
2693 Female, age 94, both hemispheres 46.3
Perirhinal gyrus
nTPM: 48.3
1794 Male, age 80, right hemisphere 50.4
1847 Female, age 91, left hemisphere 49.9
1841 Female, age 85, right hemisphere 48.0
2848 Male, age 76, right hemisphere 47.0
2521 Female, age 94, right hemisphere 46.1
Subiculum
nTPM: 48.8
1901 Male, age 80, both hemispheres 51.0
2042 Male, age 76, both hemispheres 50.0
1977 Female, age 85, both hemispheres 48.6
2619 Male, age 74, both hemispheres 48.2
2729 Female, age 91, right hemisphere 48.0
2438 Female, age 94, left hemisphere 47.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.8
Samples: 197

Max nTPM: 129.4
Min nTPM: 36.4
Std nTPM: 14.6
Median nTPM: 59.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 129.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 112.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 110.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 103.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 101.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 101.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 101.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 97.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 92.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 90.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 90.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.4
FF:10169-103B7 60 years, female 129.7
FF:10153-102I9 76 years, female 65.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 24.3
Min nTPM: 15.1
Sample A Female 24.3
Sample B Female 17.4
Sample C Male 16.0
Sample D Male 15.1
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 17.7
Min nTPM: 11.8
Sample A Female 14.4
Sample B Female 17.7
Sample C Male 15.0
Sample D Male 11.8
Subiculum
nTPM: 13.9
Samples: 4

Max nTPM: 17.8
Min nTPM: 11.0
Sample A Female 17.8
Sample B Female 13.9
Sample C Male 11.0
Sample D Male 12.8
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.6
Min nTPM: 12.0
Sample A Female 16.5
Sample B Female 12.0
Sample C Male 16.1
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.5
Samples: 4

Max nTPM: 113.3
Min nTPM: 93.8
Sample A Male 96.4
Sample B Male 113.3
Sample C Female 106.3
Sample D Female 93.8
Hippocampal formation
nTPM: 107.9
Samples: 4

Max nTPM: 120.9
Min nTPM: 102.5
Sample A Male 120.9
Sample B Male 102.5
Sample C Female 103.9
Sample D Female 104.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70795817 Antisense, RP_050712_02_A06, Mouse strain C57BL/6J (56 days, male) 0.3

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