HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:103.9 nTPM
HPA:103.9 nTPM
GTEx:95.2 nTPM
FANTOM5:254.5 Scaled Tags Per Million
Pig:90.9 nTPM
Mouse:152.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018129
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.9
Sample id Sample description nTPM
Hippocampus
nTPM: 97.0
1898 Male, age 80, left hemisphere 108.3
1855 Male, age 76, left hemisphere 101.5
2529 Female, age 94, left hemisphere 94.8
2621 Female, age 67, right hemisphere 93.5
1911 Female, age 85, right hemisphere 92.3
2148 Female, age 91, left hemisphere 91.6
Dentate gyrus
nTPM: 96.9
2010 Male, age 76, both hemispheres 101.5
2528 Male, age 74, both hemispheres 101.3
1927 Female, age 91, both hemispheres 98.0
2246 Female, age 85, both hemispheres 96.2
2531 Female, age 67, both hemispheres 93.4
2530 Female, age 94, left hemisphere 90.7
Entorhinal gyrus
nTPM: 91.8
1938 Female, age 85, left hemisphere 100.6
2764 Male, age 80, right hemisphere 96.8
2117 Female, age 91, right hemisphere 95.4
1787 Male, age 76, left hemisphere 91.4
2613 Female, age 94, left hemisphere 87.6
2686 Male, age 75, right hemisphere 78.9
Hippocampus, CA1
nTPM: 102.2
2749 Male, age 80, left hemisphere 122.5
1873 Female, age 85, both hemispheres 105.8
2527 Male, age 74, both hemispheres 101.9
2045 Male, age 76, both hemispheres 93.5
2082 Female, age 91, right hemisphere 87.2
Hippocampus, CA2
nTPM: 95.1
2249 Male, age 74, both hemispheres 103.7
1940 Female, age 85, left hemisphere 103.0
1963 Male, age 80, left hemisphere 100.7
1892 Male, age 76, both hemispheres 90.1
2113 Female, age 91, right hemisphere 89.6
2437 Female, age 94, left hemisphere 83.5
Hippocampus, CA3
nTPM: 96.3
2137 Male, age 80, left hemisphere 109.8
2620 Female, age 94, left hemisphere 95.8
1867 Male, age 76, both hemispheres 95.6
2436 Male, age 74, both hemispheres 95.5
1891 Female, age 85, both hemispheres 93.4
2861 Female, age 67, both hemispheres 87.7
Parahippocampal cortex
nTPM: 96.2
1850 Male, age 80, both hemispheres 104.0
1933 Female, age 85, both hemispheres 101.7
2532 Female, age 72, left hemisphere 100.2
2245 Female, age 91, both hemispheres 98.4
2250 Female, age 67, right hemisphere 98.0
1990 Female, age 91, right hemisphere 96.6
2692 Male, age 74, both hemispheres 93.7
2018 Male, age 76, both hemispheres 92.3
2693 Female, age 94, both hemispheres 90.8
2622 Female, age 67, right hemisphere 86.2
Perirhinal gyrus
nTPM: 103.9
1841 Female, age 85, right hemisphere 116.2
1794 Male, age 80, right hemisphere 108.3
1847 Female, age 91, left hemisphere 106.8
2521 Female, age 94, right hemisphere 101.6
2848 Male, age 76, right hemisphere 86.4
Subiculum
nTPM: 93.9
2619 Male, age 74, both hemispheres 103.9
1977 Female, age 85, both hemispheres 101.1
1901 Male, age 80, both hemispheres 97.3
2042 Male, age 76, both hemispheres 88.2
2729 Female, age 91, right hemisphere 87.6
2438 Female, age 94, left hemisphere 85.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.2
Samples: 197

Max nTPM: 205.1
Min nTPM: 49.9
Std nTPM: 25.1
Median nTPM: 92.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 205.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 180.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 166.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 160.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 158.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 148.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 144.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 144.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 141.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 137.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 137.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 254.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 254.5
FF:10169-103B7 60 years, female 319.1
FF:10153-102I9 76 years, female 189.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 90.9
Samples: 4

Max nTPM: 107.4
Min nTPM: 78.3
Sample A Female 107.4
Sample B Female 90.9
Sample C Male 87.0
Sample D Male 78.3
Entorhinal cortex
nTPM: 81.4
Samples: 4

Max nTPM: 93.0
Min nTPM: 67.8
Sample A Female 79.6
Sample B Female 93.0
Sample C Male 85.3
Sample D Male 67.8
Subiculum
nTPM: 76.7
Samples: 4

Max nTPM: 94.4
Min nTPM: 66.0
Sample A Female 94.4
Sample B Female 73.1
Sample C Male 73.3
Sample D Male 66.0
Ventral hippocampus
nTPM: 80.6
Samples: 4

Max nTPM: 93.6
Min nTPM: 68.0
Sample A Female 85.2
Sample B Female 68.0
Sample C Male 93.6
Sample D Male 75.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 152.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 148.4
Samples: 4

Max nTPM: 155.0
Min nTPM: 143.2
Sample A Male 143.5
Sample B Male 155.0
Sample C Female 143.2
Sample D Female 152.0
Hippocampal formation
nTPM: 152.7
Samples: 4

Max nTPM: 172.5
Min nTPM: 132.8
Sample A Male 172.5
Sample B Male 152.1
Sample C Female 153.5
Sample D Female 132.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
1138 Antisense, RP_Baylor_103133, Mouse strain C57BL/6J (56 days, male) 0.6
1140 Antisense, RP_Baylor_103133, Mouse strain C57BL/6J (56 days, male) 0.0
1139 Sense, RPS_Baylor_37072, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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