HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:26.2 nTPM
HPA:26.2 nTPM
GTEx:25.7 nTPM
FANTOM5:48.1 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:32.6 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014773Antibody HPA057174
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.2
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
2621 Female, age 67, right hemisphere 29.1
1855 Male, age 76, left hemisphere 27.7
2529 Female, age 94, left hemisphere 24.7
1911 Female, age 85, right hemisphere 23.7
1898 Male, age 80, left hemisphere 22.9
2148 Female, age 91, left hemisphere 21.6
Dentate gyrus
nTPM: 23.9
2010 Male, age 76, both hemispheres 29.1
2530 Female, age 94, left hemisphere 27.9
2531 Female, age 67, both hemispheres 24.2
2528 Male, age 74, both hemispheres 22.3
2246 Female, age 85, both hemispheres 20.5
1927 Female, age 91, both hemispheres 19.6
Entorhinal gyrus
nTPM: 26.2
2613 Female, age 94, left hemisphere 28.3
1787 Male, age 76, left hemisphere 27.0
2117 Female, age 91, right hemisphere 26.8
1938 Female, age 85, left hemisphere 25.7
2686 Male, age 75, right hemisphere 24.9
2764 Male, age 80, right hemisphere 24.2
Hippocampus, CA1
nTPM: 25.4
2749 Male, age 80, left hemisphere 32.0
2527 Male, age 74, both hemispheres 27.4
2082 Female, age 91, right hemisphere 24.1
2045 Male, age 76, both hemispheres 21.9
1873 Female, age 85, both hemispheres 21.5
Hippocampus, CA2
nTPM: 24.8
1940 Female, age 85, left hemisphere 27.8
1963 Male, age 80, left hemisphere 26.9
2113 Female, age 91, right hemisphere 25.7
2249 Male, age 74, both hemispheres 24.4
2437 Female, age 94, left hemisphere 23.8
1892 Male, age 76, both hemispheres 20.4
Hippocampus, CA3
nTPM: 23.1
2861 Female, age 67, both hemispheres 28.7
2137 Male, age 80, left hemisphere 26.6
2436 Male, age 74, both hemispheres 22.5
1867 Male, age 76, both hemispheres 22.1
1891 Female, age 85, both hemispheres 20.6
2620 Female, age 94, left hemisphere 18.1
Parahippocampal cortex
nTPM: 25.9
2018 Male, age 76, both hemispheres 32.5
2532 Female, age 72, left hemisphere 28.9
2622 Female, age 67, right hemisphere 28.4
1933 Female, age 85, both hemispheres 25.6
2693 Female, age 94, both hemispheres 25.4
2250 Female, age 67, right hemisphere 25.0
2245 Female, age 91, both hemispheres 24.6
1850 Male, age 80, both hemispheres 23.3
2692 Male, age 74, both hemispheres 22.7
1990 Female, age 91, right hemisphere 22.4
Perirhinal gyrus
nTPM: 25.6
1841 Female, age 85, right hemisphere 27.9
2521 Female, age 94, right hemisphere 26.3
2848 Male, age 76, right hemisphere 24.7
1794 Male, age 80, right hemisphere 24.6
1847 Female, age 91, left hemisphere 24.4
Subiculum
nTPM: 23.8
2042 Male, age 76, both hemispheres 29.1
2438 Female, age 94, left hemisphere 24.1
2619 Male, age 74, both hemispheres 23.5
2729 Female, age 91, right hemisphere 23.3
1901 Male, age 80, both hemispheres 21.9
1977 Female, age 85, both hemispheres 20.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.7
Samples: 197

Max nTPM: 54.0
Min nTPM: 9.8
Std nTPM: 8.3
Median nTPM: 23.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 54.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 52.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 51.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 47.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 47.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 45.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 44.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 43.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 39.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 39.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 39.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.1
FF:10169-103B7 60 years, female 52.3
FF:10153-102I9 76 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 16.8
Min nTPM: 10.7
Sample A Female 16.8
Sample B Female 14.5
Sample C Male 16.3
Sample D Male 10.7
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.2
Sample A Female 13.7
Sample B Female 12.6
Sample C Male 16.0
Sample D Male 10.2
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.5
Sample A Female 17.4
Sample B Female 14.5
Sample C Male 17.3
Sample D Male 15.7
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 19.8
Min nTPM: 12.4
Sample A Female 15.7
Sample B Female 12.4
Sample C Male 19.8
Sample D Male 13.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.6
Samples: 4

Max nTPM: 34.9
Min nTPM: 29.6
Sample A Male 34.9
Sample B Male 32.4
Sample C Female 29.6
Sample D Female 33.4
Hippocampal formation
nTPM: 25.8
Samples: 4

Max nTPM: 26.7
Min nTPM: 24.8
Sample A Male 24.8
Sample B Male 26.7
Sample C Female 25.3
Sample D Female 26.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
75828167 Antisense, RP_060601_01_E03, Mouse strain C57BL/6J (56 days, male) 2.6

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