HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:55.1 nTPM
HPA:55.1 nTPM
GTEx:51.4 nTPM
FANTOM5:22.8 Scaled Tags Per Million
Pig:35.7 nTPM
Mouse:42.3 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.1
Sample id Sample description nTPM
Hippocampus
nTPM: 40.7
2148 Female, age 91, left hemisphere 64.4
2621 Female, age 67, right hemisphere 50.9
1911 Female, age 85, right hemisphere 45.4
1855 Male, age 76, left hemisphere 31.4
1898 Male, age 80, left hemisphere 28.9
2529 Female, age 94, left hemisphere 23.2
Dentate gyrus
nTPM: 47.0
2531 Female, age 67, both hemispheres 82.4
1927 Female, age 91, both hemispheres 65.9
2528 Male, age 74, both hemispheres 44.8
2246 Female, age 85, both hemispheres 40.8
2010 Male, age 76, both hemispheres 25.0
2530 Female, age 94, left hemisphere 23.4
Entorhinal gyrus
nTPM: 31.4
2613 Female, age 94, left hemisphere 52.7
2686 Male, age 75, right hemisphere 35.6
2764 Male, age 80, right hemisphere 32.1
1787 Male, age 76, left hemisphere 26.8
1938 Female, age 85, left hemisphere 25.2
2117 Female, age 91, right hemisphere 15.9
Hippocampus, CA1
nTPM: 46.3
2749 Male, age 80, left hemisphere 59.1
2045 Male, age 76, both hemispheres 52.9
2527 Male, age 74, both hemispheres 43.2
1873 Female, age 85, both hemispheres 39.1
2082 Female, age 91, right hemisphere 37.3
Hippocampus, CA2
nTPM: 31.5
2249 Male, age 74, both hemispheres 37.2
2113 Female, age 91, right hemisphere 35.9
1892 Male, age 76, both hemispheres 33.5
1963 Male, age 80, left hemisphere 28.9
2437 Female, age 94, left hemisphere 28.6
1940 Female, age 85, left hemisphere 24.8
Hippocampus, CA3
nTPM: 55.1
2620 Female, age 94, left hemisphere 92.8
2861 Female, age 67, both hemispheres 78.9
2137 Male, age 80, left hemisphere 66.8
2436 Male, age 74, both hemispheres 31.8
1867 Male, age 76, both hemispheres 30.9
1891 Female, age 85, both hemispheres 29.3
Parahippocampal cortex
nTPM: 33.9
2693 Female, age 94, both hemispheres 48.9
2622 Female, age 67, right hemisphere 46.0
2245 Female, age 91, both hemispheres 45.1
2250 Female, age 67, right hemisphere 37.2
1990 Female, age 91, right hemisphere 28.3
1933 Female, age 85, both hemispheres 28.1
2532 Female, age 72, left hemisphere 27.3
2692 Male, age 74, both hemispheres 26.4
1850 Male, age 80, both hemispheres 26.3
2018 Male, age 76, both hemispheres 24.9
Perirhinal gyrus
nTPM: 36.5
2521 Female, age 94, right hemisphere 48.9
1847 Female, age 91, left hemisphere 37.4
1794 Male, age 80, right hemisphere 36.2
1841 Female, age 85, right hemisphere 32.2
2848 Male, age 76, right hemisphere 27.8
Subiculum
nTPM: 26.3
2729 Female, age 91, right hemisphere 38.5
1901 Male, age 80, both hemispheres 26.1
1977 Female, age 85, both hemispheres 25.9
2619 Male, age 74, both hemispheres 25.6
2438 Female, age 94, left hemisphere 22.9
2042 Male, age 76, both hemispheres 18.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.4
Samples: 197

Max nTPM: 216.3
Min nTPM: 4.7
Std nTPM: 29.8
Median nTPM: 47.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 216.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 136.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 122.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 118.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 115.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 106.8
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 105.0
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 101.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 100.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 98.3
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 97.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.8
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 18.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 41.9
Min nTPM: 20.8
Sample A Female 41.2
Sample B Female 41.9
Sample C Male 20.8
Sample D Male 38.8
Entorhinal cortex
nTPM: 25.9
Samples: 4

Max nTPM: 27.8
Min nTPM: 24.8
Sample A Female 27.8
Sample B Female 25.0
Sample C Male 24.8
Sample D Male 26.0
Subiculum
nTPM: 21.4
Samples: 4

Max nTPM: 31.4
Min nTPM: 15.7
Sample A Female 31.4
Sample B Female 19.3
Sample C Male 19.2
Sample D Male 15.7
Ventral hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 46.4
Min nTPM: 20.3
Sample A Female 20.3
Sample B Female 20.7
Sample C Male 23.2
Sample D Male 46.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.5
Samples: 4

Max nTPM: 38.2
Min nTPM: 34.7
Sample A Male 37.4
Sample B Male 35.8
Sample C Female 34.7
Sample D Female 38.2
Hippocampal formation
nTPM: 42.3
Samples: 4

Max nTPM: 47.3
Min nTPM: 37.7
Sample A Male 38.0
Sample B Male 47.3
Sample C Female 46.0
Sample D Female 37.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
70305419 Antisense, RP_050609_04_B06, Mouse strain C57BL/6J (56 days, male) 17.8

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