COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:26.3 nTPM
HPA:19.7 nTPM
GTEx:26.3 nTPM
FANTOM5:32.1 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 19.7
overview
Male, age 54 		Colon sample 67
nTPM: 12
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 14.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 10.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 22.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 25.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 25.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 14.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 19.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 21.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 20.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 26
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 28.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 26.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 23.3
Samples: 373

Max nTPM: 86.7
Min nTPM: 6.7
Std nTPM: 12.1
Median nTPM: 20.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 86.7
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 69.3
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 67.5
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 66.7
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 64.7
GTEX-145LS-2926-SM-5O99G 60-69 years, female 64.0
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 63.5
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 59.9
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 59.0
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 57.7
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 56.9
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Colon - Transverse
Average nTPM: 26.3
Samples: 406

Max nTPM: 99.6
Min nTPM: 7.9
Std nTPM: 15.3
Median nTPM: 20.9
GTEX-17EVQ-1826-SM-7IGPH 70-79 years, male 99.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 95.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 87.0
GTEX-15DYW-2326-SM-6PAMU 60-69 years, female 86.6
GTEX-1C6VQ-2726-SM-73KUL 50-59 years, male 76.2
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 74.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 72.6
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 70.8
GTEX-1S5VW-2926-SM-E9U6H 60-69 years, male 67.7
GTEX-14ICK-1026-SM-6AJA4 40-49 years, male 67.4
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 66.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 32.1
FF:10014-101C5 62,83,84 years, mixed 32.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.