HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.7 nTPM
HPA:17.7 nTPM
GTEx:9.3 nTPM
FANTOM5:31.8 Scaled Tags Per Million
Pig:44.8 nTPM
Mouse:58.2 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036933Antibody HPA057511Antibody CAB037196
Glial cells MediumHighLow
Neuronal cells HighMediumHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.8
1855 Male, age 76, left hemisphere 18.1
1898 Male, age 80, left hemisphere 17.4
2621 Female, age 67, right hemisphere 16.2
2148 Female, age 91, left hemisphere 13.3
1911 Female, age 85, right hemisphere 12.9
2529 Female, age 94, left hemisphere 10.7
Dentate gyrus
nTPM: 13.5
2010 Male, age 76, both hemispheres 16.9
1927 Female, age 91, both hemispheres 14.7
2530 Female, age 94, left hemisphere 13.2
2246 Female, age 85, both hemispheres 13.1
2528 Male, age 74, both hemispheres 12.1
2531 Female, age 67, both hemispheres 11.1
Entorhinal gyrus
nTPM: 12.0
1938 Female, age 85, left hemisphere 12.8
1787 Male, age 76, left hemisphere 12.3
2117 Female, age 91, right hemisphere 12.1
2686 Male, age 75, right hemisphere 12.1
2613 Female, age 94, left hemisphere 11.6
2764 Male, age 80, right hemisphere 11.0
Hippocampus, CA1
nTPM: 14.6
2749 Male, age 80, left hemisphere 22.3
1873 Female, age 85, both hemispheres 14.2
2045 Male, age 76, both hemispheres 14.0
2527 Male, age 74, both hemispheres 12.0
2082 Female, age 91, right hemisphere 10.2
Hippocampus, CA2
nTPM: 13.7
1892 Male, age 76, both hemispheres 17.3
2249 Male, age 74, both hemispheres 14.7
2437 Female, age 94, left hemisphere 14.1
1963 Male, age 80, left hemisphere 13.2
1940 Female, age 85, left hemisphere 11.6
2113 Female, age 91, right hemisphere 11.3
Hippocampus, CA3
nTPM: 17.7
2436 Male, age 74, both hemispheres 31.8
2137 Male, age 80, left hemisphere 19.5
1867 Male, age 76, both hemispheres 17.0
1891 Female, age 85, both hemispheres 12.8
2620 Female, age 94, left hemisphere 12.6
2861 Female, age 67, both hemispheres 12.4
Parahippocampal cortex
nTPM: 12.6
2693 Female, age 94, both hemispheres 14.4
2245 Female, age 91, both hemispheres 14.3
2622 Female, age 67, right hemisphere 14.2
2018 Male, age 76, both hemispheres 12.5
1933 Female, age 85, both hemispheres 12.3
2692 Male, age 74, both hemispheres 12.3
1850 Male, age 80, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.8
1990 Female, age 91, right hemisphere 11.5
2250 Female, age 67, right hemisphere 11.2
Perirhinal gyrus
nTPM: 11.9
1841 Female, age 85, right hemisphere 12.3
1847 Female, age 91, left hemisphere 12.3
2521 Female, age 94, right hemisphere 11.9
2848 Male, age 76, right hemisphere 11.9
1794 Male, age 80, right hemisphere 11.3
Subiculum
nTPM: 14.4
1901 Male, age 80, both hemispheres 17.5
2042 Male, age 76, both hemispheres 16.2
2438 Female, age 94, left hemisphere 14.9
1977 Female, age 85, both hemispheres 12.7
2619 Male, age 74, both hemispheres 12.5
2729 Female, age 91, right hemisphere 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.3
Samples: 197

Max nTPM: 18.4
Min nTPM: 4.4
Std nTPM: 2.5
Median nTPM: 8.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 18.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 17.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 17.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 16.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 15.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 15.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 15.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 15.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 14.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 14.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 14.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.8
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.9
Samples: 4

Max nTPM: 56.3
Min nTPM: 25.2
Sample A Female 56.3
Sample B Female 53.8
Sample C Male 25.2
Sample D Male 44.1
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 25.9
Min nTPM: 20.5
Sample A Female 25.9
Sample B Female 20.5
Sample C Male 23.6
Sample D Male 22.0
Subiculum
nTPM: 23.3
Samples: 4

Max nTPM: 26.9
Min nTPM: 19.7
Sample A Female 26.2
Sample B Female 19.7
Sample C Male 26.9
Sample D Male 20.3
Ventral hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 46.0
Min nTPM: 27.2
Sample A Female 40.5
Sample B Female 27.2
Sample C Male 39.0
Sample D Male 46.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.4
Sample A Male 24.7
Sample B Male 21.0
Sample C Female 28.2
Sample D Female 20.4
Hippocampal formation
nTPM: 58.3
Samples: 4

Max nTPM: 74.1
Min nTPM: 43.1
Sample A Male 43.1
Sample B Male 67.8
Sample C Female 74.1
Sample D Female 48.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
69887337 Antisense, RP_050512_03_E05, Mouse strain C57BL/6J (56 days, male) 12.5
73929869 Antisense, RP_051214_03_H03, Mouse strain C57BL/6J (56 days, male) 9.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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