COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Low
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.9 nTPM
HPA:37.9 nTPM
GTEx:27.0 nTPM
FANTOM5:35.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA037813Antibody HPA037814
Endothelial cells MediumLow
Glandular cells LowHigh
Peripheral nerve/ganglion LowLow




COLON - HPA RNA-seqi
Average nTPM 37.9
overview
Male, age 54 		Colon sample 67
nTPM: 36
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 35.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 32.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 28.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 33
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 32.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 43.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 33.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 34.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 42.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 55.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 41.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 43.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 27.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 13.6
Samples: 373

Max nTPM: 47.4
Min nTPM: 4.2
Std nTPM: 6.1
Median nTPM: 12.0
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 47.4
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 46.5
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 39.0
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 38.8
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 36.2
GTEX-1OJC3-1826-SM-DTX93 20-29 years, male 36.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 34.5
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 32.0
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 31.2
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 29.0
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 28.7
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Colon - Transverse
Average nTPM: 27.0
Samples: 406

Max nTPM: 85.0
Min nTPM: 5.1
Std nTPM: 13.7
Median nTPM: 24.7
GTEX-ZEX8-1926-SM-4WKFR 50-59 years, male 85.0
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 67.8
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 65.0
GTEX-1KANC-0926-SM-D3LA9 50-59 years, female 63.4
GTEX-14PKV-2126-SM-664O3 20-29 years, female 61.6
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 61.5
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 61.2
GTEX-144GM-1226-SM-5LU52 20-29 years, male 59.8
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 59.0
GTEX-1B8KE-1926-SM-731EE 50-59 years, male 55.2
GTEX-QCQG-1626-SM-48U26 50-59 years, female 55.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 35.1
FF:10014-101C5 62,83,84 years, mixed 35.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.