HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:61.9 nTPM
HPA:61.9 nTPM
GTEx:72.1 nTPM
FANTOM5:583.9 Scaled Tags Per Million
Pig:45.5 nTPM
Mouse:66.4 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.9
Sample id Sample description nTPM
Hippocampus
nTPM: 23.1
2621 Female, age 67, right hemisphere 43.8
1898 Male, age 80, left hemisphere 29.3
1855 Male, age 76, left hemisphere 25.0
2148 Female, age 91, left hemisphere 20.8
2529 Female, age 94, left hemisphere 15.6
1911 Female, age 85, right hemisphere 4.3
Dentate gyrus
nTPM: 25.4
2530 Female, age 94, left hemisphere 40.6
2531 Female, age 67, both hemispheres 34.5
2246 Female, age 85, both hemispheres 25.8
1927 Female, age 91, both hemispheres 19.1
2010 Male, age 76, both hemispheres 17.0
2528 Male, age 74, both hemispheres 15.6
Entorhinal gyrus
nTPM: 49.1
2613 Female, age 94, left hemisphere 88.8
2764 Male, age 80, right hemisphere 64.5
1787 Male, age 76, left hemisphere 46.5
1938 Female, age 85, left hemisphere 41.3
2686 Male, age 75, right hemisphere 39.0
2117 Female, age 91, right hemisphere 14.4
Hippocampus, CA1
nTPM: 25.5
2749 Male, age 80, left hemisphere 41.6
2082 Female, age 91, right hemisphere 26.8
2045 Male, age 76, both hemispheres 26.4
1873 Female, age 85, both hemispheres 18.7
2527 Male, age 74, both hemispheres 14.0
Hippocampus, CA2
nTPM: 18.3
2437 Female, age 94, left hemisphere 32.9
1892 Male, age 76, both hemispheres 29.0
1963 Male, age 80, left hemisphere 18.2
1940 Female, age 85, left hemisphere 15.4
2113 Female, age 91, right hemisphere 14.2
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 25.1
2861 Female, age 67, both hemispheres 86.2
2620 Female, age 94, left hemisphere 39.9
2137 Male, age 80, left hemisphere 16.4
1867 Male, age 76, both hemispheres 8.1
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 39.5
2622 Female, age 67, right hemisphere 69.2
2245 Female, age 91, both hemispheres 53.5
2693 Female, age 94, both hemispheres 49.7
1933 Female, age 85, both hemispheres 45.6
2250 Female, age 67, right hemisphere 39.4
1850 Male, age 80, both hemispheres 37.3
2532 Female, age 72, left hemisphere 33.4
2018 Male, age 76, both hemispheres 24.7
1990 Female, age 91, right hemisphere 24.5
2692 Male, age 74, both hemispheres 18.0
Perirhinal gyrus
nTPM: 61.9
2521 Female, age 94, right hemisphere 91.3
1847 Female, age 91, left hemisphere 72.8
1794 Male, age 80, right hemisphere 65.7
2848 Male, age 76, right hemisphere 41.2
1841 Female, age 85, right hemisphere 38.5
Subiculum
nTPM: 11.6
1977 Female, age 85, both hemispheres 36.1
2619 Male, age 74, both hemispheres 18.4
2438 Female, age 94, left hemisphere 6.6
1901 Male, age 80, both hemispheres 5.0
2729 Female, age 91, right hemisphere 3.8
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.1
Samples: 197

Max nTPM: 185.0
Min nTPM: 9.4
Std nTPM: 32.2
Median nTPM: 67.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 185.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 156.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 152.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 148.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 144.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 143.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 141.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 141.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 135.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 133.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 131.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 583.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 583.9
FF:10169-103B7 60 years, female 729.3
FF:10153-102I9 76 years, female 438.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 46.3
Min nTPM: 29.7
Sample A Female 45.5
Sample B Female 46.3
Sample C Male 42.8
Sample D Male 29.7
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 47.5
Min nTPM: 34.7
Sample A Female 46.1
Sample B Female 36.6
Sample C Male 47.5
Sample D Male 34.7
Subiculum
nTPM: 41.4
Samples: 4

Max nTPM: 51.6
Min nTPM: 29.4
Sample A Female 51.6
Sample B Female 40.6
Sample C Male 43.8
Sample D Male 29.4
Ventral hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 60.7
Min nTPM: 35.0
Sample A Female 39.7
Sample B Female 35.0
Sample C Male 60.7
Sample D Male 46.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.4
Samples: 4

Max nTPM: 91.3
Min nTPM: 51.7
Sample A Male 60.2
Sample B Male 62.3
Sample C Female 51.7
Sample D Female 91.3
Hippocampal formation
nTPM: 48.0
Samples: 4

Max nTPM: 53.5
Min nTPM: 40.8
Sample A Male 40.8
Sample B Male 53.5
Sample C Female 46.8
Sample D Female 50.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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