HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.7 nTPM
HPA:14.7 nTPM
GTEx:9.9 nTPM
FANTOM5:18.1 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:15.8 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008835
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.0
2529 Female, age 94, left hemisphere 16.8
2148 Female, age 91, left hemisphere 15.3
1855 Male, age 76, left hemisphere 14.0
1898 Male, age 80, left hemisphere 13.1
1911 Female, age 85, right hemisphere 12.9
2621 Female, age 67, right hemisphere 12.0
Dentate gyrus
nTPM: 12.5
2528 Male, age 74, both hemispheres 14.9
2530 Female, age 94, left hemisphere 14.4
2246 Female, age 85, both hemispheres 13.6
2531 Female, age 67, both hemispheres 11.3
1927 Female, age 91, both hemispheres 10.8
2010 Male, age 76, both hemispheres 9.9
Entorhinal gyrus
nTPM: 12.4
2117 Female, age 91, right hemisphere 17.2
2686 Male, age 75, right hemisphere 13.9
1787 Male, age 76, left hemisphere 11.6
2613 Female, age 94, left hemisphere 11.0
1938 Female, age 85, left hemisphere 10.9
2764 Male, age 80, right hemisphere 9.8
Hippocampus, CA1
nTPM: 13.3
2527 Male, age 74, both hemispheres 21.1
2082 Female, age 91, right hemisphere 16.1
1873 Female, age 85, both hemispheres 11.1
2045 Male, age 76, both hemispheres 9.2
2749 Male, age 80, left hemisphere 8.7
Hippocampus, CA2
nTPM: 13.6
2249 Male, age 74, both hemispheres 16.9
2113 Female, age 91, right hemisphere 16.4
1963 Male, age 80, left hemisphere 14.6
1940 Female, age 85, left hemisphere 13.7
2437 Female, age 94, left hemisphere 12.4
1892 Male, age 76, both hemispheres 7.5
Hippocampus, CA3
nTPM: 13.0
2436 Male, age 74, both hemispheres 23.5
2861 Female, age 67, both hemispheres 14.9
1891 Female, age 85, both hemispheres 11.9
2137 Male, age 80, left hemisphere 10.4
1867 Male, age 76, both hemispheres 8.7
2620 Female, age 94, left hemisphere 8.4
Parahippocampal cortex
nTPM: 13.0
2692 Male, age 74, both hemispheres 19.8
2622 Female, age 67, right hemisphere 16.0
2250 Female, age 67, right hemisphere 13.1
2018 Male, age 76, both hemispheres 12.9
1990 Female, age 91, right hemisphere 12.2
1933 Female, age 85, both hemispheres 11.8
2245 Female, age 91, both hemispheres 11.8
2693 Female, age 94, both hemispheres 11.4
1850 Male, age 80, both hemispheres 11.2
2532 Female, age 72, left hemisphere 9.4
Perirhinal gyrus
nTPM: 11.1
1847 Female, age 91, left hemisphere 12.9
1794 Male, age 80, right hemisphere 12.2
2521 Female, age 94, right hemisphere 11.0
1841 Female, age 85, right hemisphere 10.5
2848 Male, age 76, right hemisphere 8.8
Subiculum
nTPM: 14.7
2619 Male, age 74, both hemispheres 20.1
2438 Female, age 94, left hemisphere 19.7
2729 Female, age 91, right hemisphere 16.6
1977 Female, age 85, both hemispheres 10.8
2042 Male, age 76, both hemispheres 10.7
1901 Male, age 80, both hemispheres 10.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.9
Samples: 197

Max nTPM: 22.7
Min nTPM: 3.0
Std nTPM: 3.5
Median nTPM: 9.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 22.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 21.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 20.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 20.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 18.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 18.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 17.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 17.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 17.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 17.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 16.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.1
FF:10153-102I9 76 years, female 26.8
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.5
Sample A Female 15.6
Sample B Female 12.8
Sample C Male 12.3
Sample D Male 10.5
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 20.4
Min nTPM: 14.7
Sample A Female 19.1
Sample B Female 20.4
Sample C Male 15.9
Sample D Male 14.7
Subiculum
nTPM: 14.9
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.2
Sample A Female 17.8
Sample B Female 14.1
Sample C Male 13.2
Sample D Male 14.5
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 18.7
Min nTPM: 12.1
Sample A Female 15.0
Sample B Female 12.1
Sample C Male 18.7
Sample D Male 13.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 17.3
Min nTPM: 14.1
Sample A Male 17.3
Sample B Male 14.1
Sample C Female 15.7
Sample D Female 14.7
Hippocampal formation
nTPM: 15.8
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.9
Sample A Male 14.9
Sample B Male 14.9
Sample C Female 15.4
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
1478 Antisense, RP_Baylor_102701, Mouse strain C57BL/6J (56 days, male) 1.3
100142537 Antisense, RP_110421_03_F04, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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