HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:52.0 nTPM
HPA:52.0 nTPM
GTEx:73.8 nTPM
FANTOM5:213.5 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:138.8 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036591
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.0
Sample id Sample description nTPM
Hippocampus
nTPM: 51.0
1898 Male, age 80, left hemisphere 55.3
2529 Female, age 94, left hemisphere 54.3
1911 Female, age 85, right hemisphere 49.8
2148 Female, age 91, left hemisphere 49.7
1855 Male, age 76, left hemisphere 48.9
2621 Female, age 67, right hemisphere 48.1
Dentate gyrus
nTPM: 48.7
2010 Male, age 76, both hemispheres 53.2
2246 Female, age 85, both hemispheres 49.9
2528 Male, age 74, both hemispheres 49.4
2530 Female, age 94, left hemisphere 47.5
1927 Female, age 91, both hemispheres 46.9
2531 Female, age 67, both hemispheres 45.4
Entorhinal gyrus
nTPM: 47.5
2764 Male, age 80, right hemisphere 53.2
1938 Female, age 85, left hemisphere 52.8
2117 Female, age 91, right hemisphere 51.4
1787 Male, age 76, left hemisphere 47.1
2686 Male, age 75, right hemisphere 41.7
2613 Female, age 94, left hemisphere 38.9
Hippocampus, CA1
nTPM: 52.0
2749 Male, age 80, left hemisphere 62.4
1873 Female, age 85, both hemispheres 54.3
2527 Male, age 74, both hemispheres 48.3
2045 Male, age 76, both hemispheres 47.8
2082 Female, age 91, right hemisphere 47.4
Hippocampus, CA2
nTPM: 50.0
1892 Male, age 76, both hemispheres 56.9
1963 Male, age 80, left hemisphere 51.2
2249 Male, age 74, both hemispheres 50.9
2437 Female, age 94, left hemisphere 49.0
1940 Female, age 85, left hemisphere 47.3
2113 Female, age 91, right hemisphere 44.5
Hippocampus, CA3
nTPM: 51.1
2137 Male, age 80, left hemisphere 59.3
1867 Male, age 76, both hemispheres 55.8
2436 Male, age 74, both hemispheres 53.0
1891 Female, age 85, both hemispheres 52.5
2620 Female, age 94, left hemisphere 44.2
2861 Female, age 67, both hemispheres 42.0
Parahippocampal cortex
nTPM: 47.9
2245 Female, age 91, both hemispheres 55.1
1850 Male, age 80, both hemispheres 52.8
2018 Male, age 76, both hemispheres 50.9
2532 Female, age 72, left hemisphere 49.1
1990 Female, age 91, right hemisphere 48.2
1933 Female, age 85, both hemispheres 47.5
2250 Female, age 67, right hemisphere 47.5
2692 Male, age 74, both hemispheres 45.4
2622 Female, age 67, right hemisphere 43.4
2693 Female, age 94, both hemispheres 39.6
Perirhinal gyrus
nTPM: 50.5
1794 Male, age 80, right hemisphere 52.2
1841 Female, age 85, right hemisphere 51.8
1847 Female, age 91, left hemisphere 51.4
2521 Female, age 94, right hemisphere 49.6
2848 Male, age 76, right hemisphere 47.4
Subiculum
nTPM: 50.8
2438 Female, age 94, left hemisphere 58.3
1901 Male, age 80, both hemispheres 55.7
1977 Female, age 85, both hemispheres 51.2
2042 Male, age 76, both hemispheres 49.3
2619 Male, age 74, both hemispheres 47.8
2729 Female, age 91, right hemisphere 42.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.8
Samples: 197

Max nTPM: 120.0
Min nTPM: 41.4
Std nTPM: 15.4
Median nTPM: 73.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 120.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 119.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 106.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 105.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 105.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 103.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 101.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 101.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 100.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 98.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 98.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 213.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 213.5
FF:10169-103B7 60 years, female 252.1
FF:10153-102I9 76 years, female 174.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 22.0
Min nTPM: 15.7
Sample A Female 22.0
Sample B Female 17.6
Sample C Male 19.3
Sample D Male 15.7
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.7
Sample A Female 15.0
Sample B Female 16.4
Sample C Male 15.7
Sample D Male 12.7
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 20.1
Min nTPM: 15.1
Sample A Female 20.1
Sample B Female 15.1
Sample C Male 15.5
Sample D Male 15.6
Ventral hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 18.4
Min nTPM: 14.8
Sample A Female 18.4
Sample B Female 14.8
Sample C Male 16.0
Sample D Male 16.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 138.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 127.9
Samples: 4

Max nTPM: 134.8
Min nTPM: 118.1
Sample A Male 125.2
Sample B Male 134.8
Sample C Female 133.4
Sample D Female 118.1
Hippocampal formation
nTPM: 138.9
Samples: 4

Max nTPM: 158.6
Min nTPM: 128.5
Sample A Male 158.6
Sample B Male 131.5
Sample C Female 136.8
Sample D Female 128.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
69352872 Antisense, RP_050412_01_C10, Mouse strain C57BL/6J (56 days, male) 10.8

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