HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.1 nTPM
HPA:22.1 nTPM
GTEx:20.6 nTPM
FANTOM5:37.4 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:31.6 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049487
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
1911 Female, age 85, right hemisphere 22.2
1855 Male, age 76, left hemisphere 21.4
1898 Male, age 80, left hemisphere 21.4
2621 Female, age 67, right hemisphere 21.3
2529 Female, age 94, left hemisphere 21.2
2148 Female, age 91, left hemisphere 20.7
Dentate gyrus
nTPM: 21.3
2010 Male, age 76, both hemispheres 22.8
2531 Female, age 67, both hemispheres 21.3
2528 Male, age 74, both hemispheres 21.2
1927 Female, age 91, both hemispheres 21.1
2246 Female, age 85, both hemispheres 21.0
2530 Female, age 94, left hemisphere 20.3
Entorhinal gyrus
nTPM: 21.3
2117 Female, age 91, right hemisphere 22.0
2613 Female, age 94, left hemisphere 22.0
2764 Male, age 80, right hemisphere 21.2
1787 Male, age 76, left hemisphere 20.9
2686 Male, age 75, right hemisphere 20.8
1938 Female, age 85, left hemisphere 20.6
Hippocampus, CA1
nTPM: 21.3
2045 Male, age 76, both hemispheres 22.7
1873 Female, age 85, both hemispheres 22.0
2082 Female, age 91, right hemisphere 21.9
2527 Male, age 74, both hemispheres 20.1
2749 Male, age 80, left hemisphere 19.9
Hippocampus, CA2
nTPM: 22.1
1892 Male, age 76, both hemispheres 25.0
1940 Female, age 85, left hemisphere 22.3
2113 Female, age 91, right hemisphere 21.6
2249 Male, age 74, both hemispheres 21.6
1963 Male, age 80, left hemisphere 21.5
2437 Female, age 94, left hemisphere 20.8
Hippocampus, CA3
nTPM: 21.6
1867 Male, age 76, both hemispheres 24.1
1891 Female, age 85, both hemispheres 23.1
2436 Male, age 74, both hemispheres 21.5
2620 Female, age 94, left hemisphere 20.8
2137 Male, age 80, left hemisphere 20.4
2861 Female, age 67, both hemispheres 19.9
Parahippocampal cortex
nTPM: 21.6
2692 Male, age 74, both hemispheres 22.4
2018 Male, age 76, both hemispheres 22.3
2622 Female, age 67, right hemisphere 22.1
1933 Female, age 85, both hemispheres 21.9
2532 Female, age 72, left hemisphere 21.5
1990 Female, age 91, right hemisphere 21.4
1850 Male, age 80, both hemispheres 21.3
2693 Female, age 94, both hemispheres 21.3
2250 Female, age 67, right hemisphere 20.9
2245 Female, age 91, both hemispheres 20.5
Perirhinal gyrus
nTPM: 20.7
2521 Female, age 94, right hemisphere 21.2
2848 Male, age 76, right hemisphere 21.0
1794 Male, age 80, right hemisphere 20.7
1841 Female, age 85, right hemisphere 20.6
1847 Female, age 91, left hemisphere 20.1
Subiculum
nTPM: 21.8
2042 Male, age 76, both hemispheres 23.8
1901 Male, age 80, both hemispheres 22.0
2619 Male, age 74, both hemispheres 21.9
2729 Female, age 91, right hemisphere 21.9
1977 Female, age 85, both hemispheres 21.8
2438 Female, age 94, left hemisphere 19.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 39.7
Min nTPM: 15.3
Std nTPM: 3.4
Median nTPM: 20.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 39.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 34.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 28.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 27.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 27.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 27.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 27.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 27.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 26.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.4
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 31.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.5
Sample A Female 14.2
Sample B Female 12.5
Sample C Male 13.5
Sample D Male 12.6
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.2
Sample A Female 12.2
Sample B Female 14.6
Sample C Male 12.5
Sample D Male 11.2
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 12.8
Min nTPM: 11.6
Sample A Female 12.8
Sample B Female 12.5
Sample C Male 11.8
Sample D Male 11.6
Ventral hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 12.9
Min nTPM: 11.6
Sample A Female 12.9
Sample B Female 12.4
Sample C Male 11.6
Sample D Male 11.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 31.8
Min nTPM: 30.0
Sample A Male 31.7
Sample B Male 30.0
Sample C Female 31.8
Sample D Female 31.3
Hippocampal formation
nTPM: 31.6
Samples: 4

Max nTPM: 32.4
Min nTPM: 30.6
Sample A Male 32.4
Sample B Male 32.4
Sample C Female 31.1
Sample D Female 30.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69104585 Antisense, RP_050316_02_B06, Mouse strain C57BL/6J (56 days, male) 1.6

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