HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:195.5 nTPM
HPA:195.5 nTPM
GTEx:153.5 nTPM
FANTOM5:428.6 Scaled Tags Per Million
Pig:176.6 nTPM
Mouse:97.1 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038672Antibody HPA038673Antibody CAB034319
Glial cells MediumNot detectedNot detected
Neuronal cells LowLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 195.5
Sample id Sample description nTPM
Hippocampus
nTPM: 195.0
2529 Female, age 94, left hemisphere 216.5
1898 Male, age 80, left hemisphere 204.1
1855 Male, age 76, left hemisphere 190.4
1911 Female, age 85, right hemisphere 189.0
2621 Female, age 67, right hemisphere 187.7
2148 Female, age 91, left hemisphere 182.0
Dentate gyrus
nTPM: 192.4
2010 Male, age 76, both hemispheres 210.7
2530 Female, age 94, left hemisphere 205.1
2246 Female, age 85, both hemispheres 191.1
1927 Female, age 91, both hemispheres 184.9
2531 Female, age 67, both hemispheres 182.8
2528 Male, age 74, both hemispheres 180.0
Entorhinal gyrus
nTPM: 186.0
2117 Female, age 91, right hemisphere 196.3
1938 Female, age 85, left hemisphere 193.1
2764 Male, age 80, right hemisphere 188.4
1787 Male, age 76, left hemisphere 188.3
2686 Male, age 75, right hemisphere 181.6
2613 Female, age 94, left hemisphere 168.3
Hippocampus, CA1
nTPM: 195.5
2749 Male, age 80, left hemisphere 205.0
2527 Male, age 74, both hemispheres 199.3
1873 Female, age 85, both hemispheres 197.2
2045 Male, age 76, both hemispheres 195.1
2082 Female, age 91, right hemisphere 181.0
Hippocampus, CA2
nTPM: 194.6
1892 Male, age 76, both hemispheres 211.0
2249 Male, age 74, both hemispheres 195.7
1963 Male, age 80, left hemisphere 195.0
2437 Female, age 94, left hemisphere 192.1
1940 Female, age 85, left hemisphere 191.3
2113 Female, age 91, right hemisphere 182.7
Hippocampus, CA3
nTPM: 190.0
1867 Male, age 76, both hemispheres 202.1
1891 Female, age 85, both hemispheres 196.5
2137 Male, age 80, left hemisphere 194.3
2620 Female, age 94, left hemisphere 188.7
2436 Male, age 74, both hemispheres 182.8
2861 Female, age 67, both hemispheres 175.9
Parahippocampal cortex
nTPM: 186.9
1850 Male, age 80, both hemispheres 196.2
2245 Female, age 91, both hemispheres 194.1
2018 Male, age 76, both hemispheres 194.0
2532 Female, age 72, left hemisphere 191.7
1933 Female, age 85, both hemispheres 189.6
2250 Female, age 67, right hemisphere 189.1
1990 Female, age 91, right hemisphere 188.8
2692 Male, age 74, both hemispheres 185.5
2622 Female, age 67, right hemisphere 170.5
2693 Female, age 94, both hemispheres 169.9
Perirhinal gyrus
nTPM: 190.3
1841 Female, age 85, right hemisphere 199.5
2848 Male, age 76, right hemisphere 190.7
1794 Male, age 80, right hemisphere 189.5
1847 Female, age 91, left hemisphere 189.2
2521 Female, age 94, right hemisphere 182.7
Subiculum
nTPM: 195.2
2042 Male, age 76, both hemispheres 211.4
2438 Female, age 94, left hemisphere 199.7
1901 Male, age 80, both hemispheres 199.1
1977 Female, age 85, both hemispheres 195.2
2619 Male, age 74, both hemispheres 187.0
2729 Female, age 91, right hemisphere 178.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 153.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 153.5
Samples: 197

Max nTPM: 658.9
Min nTPM: 82.1
Std nTPM: 58.0
Median nTPM: 142.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 658.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 388.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 370.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 350.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 342.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 303.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 246.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 241.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 234.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 234.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 221.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 428.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 428.6
FF:10169-103B7 60 years, female 458.3
FF:10153-102I9 76 years, female 398.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 176.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 176.6
Samples: 4

Max nTPM: 230.1
Min nTPM: 125.1
Sample A Female 230.1
Sample B Female 160.8
Sample C Male 190.5
Sample D Male 125.1
Entorhinal cortex
nTPM: 129.6
Samples: 4

Max nTPM: 148.7
Min nTPM: 111.6
Sample A Female 128.4
Sample B Female 148.7
Sample C Male 129.6
Sample D Male 111.6
Subiculum
nTPM: 152.3
Samples: 4

Max nTPM: 182.9
Min nTPM: 138.0
Sample A Female 182.9
Sample B Female 146.5
Sample C Male 138.0
Sample D Male 141.9
Ventral hippocampus
nTPM: 153.8
Samples: 4

Max nTPM: 166.6
Min nTPM: 125.0
Sample A Female 164.2
Sample B Female 125.0
Sample C Male 159.3
Sample D Male 166.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.4
Samples: 4

Max nTPM: 94.6
Min nTPM: 84.7
Sample A Male 86.9
Sample B Male 84.7
Sample C Female 94.6
Sample D Female 87.4
Hippocampal formation
nTPM: 97.1
Samples: 4

Max nTPM: 106.1
Min nTPM: 89.9
Sample A Male 106.1
Sample B Male 94.8
Sample C Female 97.6
Sample D Female 89.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
75214937 Antisense, RP_060427_01_A04, Mouse strain C57BL/6J (56 days, male) 9.8

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