HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.3 nTPM
HPA:11.3 nTPM
GTEx:13.5 nTPM
FANTOM5:195.7 Scaled Tags Per Million
Pig:30.4 nTPM
Mouse:54.6 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040070Antibody HPA048183
Glial cells MediumMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.3
Sample id Sample description nTPM
Hippocampus
nTPM: 9.9
2621 Female, age 67, right hemisphere 11.1
2529 Female, age 94, left hemisphere 10.7
2148 Female, age 91, left hemisphere 9.9
1855 Male, age 76, left hemisphere 9.8
1911 Female, age 85, right hemisphere 9.3
1898 Male, age 80, left hemisphere 8.4
Dentate gyrus
nTPM: 11.3
2531 Female, age 67, both hemispheres 14.5
2246 Female, age 85, both hemispheres 13.1
2010 Male, age 76, both hemispheres 11.5
2530 Female, age 94, left hemisphere 11.0
2528 Male, age 74, both hemispheres 9.4
1927 Female, age 91, both hemispheres 8.3
Entorhinal gyrus
nTPM: 9.6
2686 Male, age 75, right hemisphere 12.7
2613 Female, age 94, left hemisphere 10.9
1787 Male, age 76, left hemisphere 10.0
1938 Female, age 85, left hemisphere 8.4
2117 Female, age 91, right hemisphere 8.2
2764 Male, age 80, right hemisphere 7.6
Hippocampus, CA1
nTPM: 9.9
2527 Male, age 74, both hemispheres 13.3
2045 Male, age 76, both hemispheres 10.2
1873 Female, age 85, both hemispheres 9.4
2749 Male, age 80, left hemisphere 9.1
2082 Female, age 91, right hemisphere 7.6
Hippocampus, CA2
nTPM: 8.5
1940 Female, age 85, left hemisphere 10.4
1892 Male, age 76, both hemispheres 9.4
2437 Female, age 94, left hemisphere 9.4
2113 Female, age 91, right hemisphere 8.0
2249 Male, age 74, both hemispheres 7.0
1963 Male, age 80, left hemisphere 6.9
Hippocampus, CA3
nTPM: 9.9
2861 Female, age 67, both hemispheres 12.5
2620 Female, age 94, left hemisphere 11.1
1891 Female, age 85, both hemispheres 9.3
2436 Male, age 74, both hemispheres 9.2
2137 Male, age 80, left hemisphere 9.1
1867 Male, age 76, both hemispheres 8.1
Parahippocampal cortex
nTPM: 10.9
2245 Female, age 91, both hemispheres 14.2
2622 Female, age 67, right hemisphere 14.2
2532 Female, age 72, left hemisphere 14.0
2692 Male, age 74, both hemispheres 11.5
2018 Male, age 76, both hemispheres 10.9
1933 Female, age 85, both hemispheres 9.6
2693 Female, age 94, both hemispheres 9.5
1850 Male, age 80, both hemispheres 8.5
2250 Female, age 67, right hemisphere 8.4
1990 Female, age 91, right hemisphere 7.7
Perirhinal gyrus
nTPM: 9.2
2521 Female, age 94, right hemisphere 11.3
2848 Male, age 76, right hemisphere 11.0
1841 Female, age 85, right hemisphere 9.7
1794 Male, age 80, right hemisphere 7.2
1847 Female, age 91, left hemisphere 6.8
Subiculum
nTPM: 9.7
2619 Male, age 74, both hemispheres 11.2
2438 Female, age 94, left hemisphere 10.9
1901 Male, age 80, both hemispheres 10.0
2042 Male, age 76, both hemispheres 9.7
2729 Female, age 91, right hemisphere 8.3
1977 Female, age 85, both hemispheres 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 28.2
Min nTPM: 6.4
Std nTPM: 3.1
Median nTPM: 13.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 28.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 25.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 25.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 20.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 20.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 19.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 19.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 19.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 18.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 18.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 195.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 195.7
FF:10169-103B7 60 years, female 245.8
FF:10153-102I9 76 years, female 145.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 32.6
Min nTPM: 26.9
Sample A Female 31.6
Sample B Female 26.9
Sample C Male 32.6
Sample D Male 30.5
Entorhinal cortex
nTPM: 28.4
Samples: 4

Max nTPM: 29.7
Min nTPM: 25.4
Sample A Female 29.7
Sample B Female 28.9
Sample C Male 25.4
Sample D Male 29.6
Subiculum
nTPM: 28.2
Samples: 4

Max nTPM: 32.6
Min nTPM: 26.2
Sample A Female 32.6
Sample B Female 26.5
Sample C Male 26.2
Sample D Male 27.6
Ventral hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 21.9
Sample A Female 27.6
Sample B Female 27.0
Sample C Male 21.9
Sample D Male 30.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.0
Samples: 4

Max nTPM: 50.3
Min nTPM: 45.9
Sample A Male 45.9
Sample B Male 50.3
Sample C Female 49.9
Sample D Female 45.9
Hippocampal formation
nTPM: 54.6
Samples: 4

Max nTPM: 59.4
Min nTPM: 49.8
Sample A Male 52.6
Sample B Male 56.6
Sample C Female 59.4
Sample D Female 49.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
73497678 Antisense, RP_051121_01_E04, Mouse strain C57BL/6J (56 days, male) 0.6

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