HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:5.3 nTPM
HPA:5.3 nTPM
GTEx:5.6 nTPM
FANTOM5:42.0 Scaled Tags Per Million
Pig:11.4 nTPM
Mouse:20.3 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039322
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.3
Sample id Sample description nTPM
Hippocampus
nTPM: 3.5
1898 Male, age 80, left hemisphere 4.0
2148 Female, age 91, left hemisphere 3.9
2621 Female, age 67, right hemisphere 3.5
1911 Female, age 85, right hemisphere 3.4
1855 Male, age 76, left hemisphere 3.0
2529 Female, age 94, left hemisphere 2.9
Dentate gyrus
nTPM: 4.8
2531 Female, age 67, both hemispheres 5.6
2528 Male, age 74, both hemispheres 5.3
1927 Female, age 91, both hemispheres 4.9
2246 Female, age 85, both hemispheres 4.9
2010 Male, age 76, both hemispheres 4.0
2530 Female, age 94, left hemisphere 3.9
Entorhinal gyrus
nTPM: 3.2
1938 Female, age 85, left hemisphere 5.6
2613 Female, age 94, left hemisphere 3.6
2764 Male, age 80, right hemisphere 3.6
2117 Female, age 91, right hemisphere 3.0
1787 Male, age 76, left hemisphere 2.5
2686 Male, age 75, right hemisphere 1.1
Hippocampus, CA1
nTPM: 3.9
2045 Male, age 76, both hemispheres 7.2
1873 Female, age 85, both hemispheres 3.9
2082 Female, age 91, right hemisphere 3.6
2527 Male, age 74, both hemispheres 3.5
2749 Male, age 80, left hemisphere 1.5
Hippocampus, CA2
nTPM: 3.5
1963 Male, age 80, left hemisphere 4.4
1940 Female, age 85, left hemisphere 3.7
2437 Female, age 94, left hemisphere 3.6
1892 Male, age 76, both hemispheres 3.4
2249 Male, age 74, both hemispheres 3.4
2113 Female, age 91, right hemisphere 2.2
Hippocampus, CA3
nTPM: 4.7
2436 Male, age 74, both hemispheres 9.8
2620 Female, age 94, left hemisphere 7.2
1867 Male, age 76, both hemispheres 3.7
1891 Female, age 85, both hemispheres 3.2
2137 Male, age 80, left hemisphere 2.2
2861 Female, age 67, both hemispheres 2.1
Parahippocampal cortex
nTPM: 4.3
2693 Female, age 94, both hemispheres 6.3
1850 Male, age 80, both hemispheres 5.6
2245 Female, age 91, both hemispheres 4.5
1990 Female, age 91, right hemisphere 4.3
2018 Male, age 76, both hemispheres 4.1
2692 Male, age 74, both hemispheres 3.9
2622 Female, age 67, right hemisphere 3.8
2250 Female, age 67, right hemisphere 3.6
2532 Female, age 72, left hemisphere 3.5
1933 Female, age 85, both hemispheres 3.3
Perirhinal gyrus
nTPM: 5.3
2848 Male, age 76, right hemisphere 5.8
1841 Female, age 85, right hemisphere 5.5
1794 Male, age 80, right hemisphere 5.3
1847 Female, age 91, left hemisphere 5.0
2521 Female, age 94, right hemisphere 4.8
Subiculum
nTPM: 4.5
2438 Female, age 94, left hemisphere 7.2
1901 Male, age 80, both hemispheres 5.1
2729 Female, age 91, right hemisphere 4.1
2619 Male, age 74, both hemispheres 3.9
1977 Female, age 85, both hemispheres 3.3
2042 Male, age 76, both hemispheres 3.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.6
Samples: 197

Max nTPM: 14.5
Min nTPM: 2.6
Std nTPM: 1.5
Median nTPM: 5.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 9.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 9.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 9.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 9.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 9.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 9.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 9.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 8.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 8.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 8.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.0
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 37.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.8
Sample A Female 9.8
Sample B Female 10.8
Sample C Male 11.8
Sample D Male 10.5
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.3
Sample A Female 11.0
Sample B Female 13.5
Sample C Male 10.8
Sample D Male 10.3
Subiculum
nTPM: 10.2
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.7
Sample A Female 11.1
Sample B Female 9.8
Sample C Male 9.7
Sample D Male 10.0
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 11.2
Min nTPM: 10.0
Sample A Female 11.2
Sample B Female 10.1
Sample C Male 10.0
Sample D Male 10.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 20.9
Min nTPM: 17.7
Sample A Male 17.7
Sample B Male 18.3
Sample C Female 19.3
Sample D Female 20.9
Hippocampal formation
nTPM: 20.3
Samples: 4

Max nTPM: 22.8
Min nTPM: 18.4
Sample A Male 18.4
Sample B Male 20.4
Sample C Female 22.8
Sample D Female 19.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
71281168 Antisense, RP_050818_02_C03, Mouse strain C57BL/6J (56 days, male) 3.2
77904691 Antisense, RP_070212_03_E09, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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