HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.5 nTPM
HPA:14.5 nTPM
GTEx:14.1 nTPM
FANTOM5:105.3 Scaled Tags Per Million
Pig:53.1 nTPM
Mouse:25.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039973
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
2621 Female, age 67, right hemisphere 24.1
2148 Female, age 91, left hemisphere 16.4
2529 Female, age 94, left hemisphere 13.7
1898 Male, age 80, left hemisphere 9.4
1855 Male, age 76, left hemisphere 6.5
1911 Female, age 85, right hemisphere 6.5
Dentate gyrus
nTPM: 14.2
2531 Female, age 67, both hemispheres 27.8
2530 Female, age 94, left hemisphere 23.8
1927 Female, age 91, both hemispheres 11.5
2246 Female, age 85, both hemispheres 11.0
2528 Male, age 74, both hemispheres 8.0
2010 Male, age 76, both hemispheres 3.1
Entorhinal gyrus
nTPM: 13.6
2613 Female, age 94, left hemisphere 22.8
2686 Male, age 75, right hemisphere 20.9
1938 Female, age 85, left hemisphere 12.1
2764 Male, age 80, right hemisphere 11.2
1787 Male, age 76, left hemisphere 8.2
2117 Female, age 91, right hemisphere 6.2
Hippocampus, CA1
nTPM: 11.2
2045 Male, age 76, both hemispheres 14.3
2527 Male, age 74, both hemispheres 12.6
1873 Female, age 85, both hemispheres 11.6
2749 Male, age 80, left hemisphere 11.2
2082 Female, age 91, right hemisphere 6.2
Hippocampus, CA2
nTPM: 7.7
1963 Male, age 80, left hemisphere 12.7
1892 Male, age 76, both hemispheres 9.8
2437 Female, age 94, left hemisphere 8.3
2249 Male, age 74, both hemispheres 6.6
2113 Female, age 91, right hemisphere 6.5
1940 Female, age 85, left hemisphere 2.4
Hippocampus, CA3
nTPM: 14.5
2861 Female, age 67, both hemispheres 27.5
2620 Female, age 94, left hemisphere 26.2
2137 Male, age 80, left hemisphere 12.6
1891 Female, age 85, both hemispheres 9.1
1867 Male, age 76, both hemispheres 8.2
2436 Male, age 74, both hemispheres 3.3
Parahippocampal cortex
nTPM: 11.6
2622 Female, age 67, right hemisphere 18.8
2692 Male, age 74, both hemispheres 16.7
2245 Female, age 91, both hemispheres 15.2
2693 Female, age 94, both hemispheres 12.9
2532 Female, age 72, left hemisphere 11.5
1850 Male, age 80, both hemispheres 10.8
2250 Female, age 67, right hemisphere 9.0
1990 Female, age 91, right hemisphere 7.9
1933 Female, age 85, both hemispheres 7.5
2018 Male, age 76, both hemispheres 5.5
Perirhinal gyrus
nTPM: 10.5
1794 Male, age 80, right hemisphere 12.5
1841 Female, age 85, right hemisphere 11.7
2848 Male, age 76, right hemisphere 11.5
1847 Female, age 91, left hemisphere 9.5
2521 Female, age 94, right hemisphere 7.3
Subiculum
nTPM: 8.8
1977 Female, age 85, both hemispheres 10.5
2729 Female, age 91, right hemisphere 9.4
2619 Male, age 74, both hemispheres 9.3
2042 Male, age 76, both hemispheres 8.9
2438 Female, age 94, left hemisphere 8.2
1901 Male, age 80, both hemispheres 6.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 25.2
Min nTPM: 8.1
Std nTPM: 2.5
Median nTPM: 13.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 25.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 21.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 20.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 20.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 19.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 19.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 19.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 18.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 18.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 18.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 18.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.3
FF:10153-102I9 76 years, female 107.0
FF:10169-103B7 60 years, female 103.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.8
Samples: 4

Max nTPM: 51.2
Min nTPM: 48.4
Sample A Female 49.5
Sample B Female 48.4
Sample C Male 50.2
Sample D Male 51.2
Entorhinal cortex
nTPM: 48.2
Samples: 4

Max nTPM: 52.9
Min nTPM: 40.7
Sample A Female 47.2
Sample B Female 40.7
Sample C Male 51.8
Sample D Male 52.9
Subiculum
nTPM: 53.1
Samples: 4

Max nTPM: 56.2
Min nTPM: 48.3
Sample A Female 56.2
Sample B Female 52.2
Sample C Male 55.6
Sample D Male 48.3
Ventral hippocampus
nTPM: 52.5
Samples: 4

Max nTPM: 54.8
Min nTPM: 47.8
Sample A Female 53.7
Sample B Female 53.7
Sample C Male 54.8
Sample D Male 47.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 27.3
Min nTPM: 22.5
Sample A Male 23.5
Sample B Male 27.3
Sample C Female 25.3
Sample D Female 22.5
Hippocampal formation
nTPM: 25.2
Samples: 4

Max nTPM: 27.8
Min nTPM: 23.5
Sample A Male 23.5
Sample B Male 27.8
Sample C Female 24.3
Sample D Female 25.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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