COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.7 nTPM
HPA:31.1 nTPM
GTEx:45.7 nTPM
FANTOM5:94.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA012008
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 31.1
overview
Male, age 54 		Colon sample 67
nTPM: 27.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 22.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 29.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 22.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 24.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 41.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 36.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 41.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 31.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 34.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 28.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 36.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 26.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 45.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 45.7
Samples: 373

Max nTPM: 79.4
Min nTPM: 19.5
Std nTPM: 12.2
Median nTPM: 43.9
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 79.4
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 77.5
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 74.1
GTEX-1IDJU-1926-SM-CL53W 60-69 years, female 74.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 73.7
GTEX-1S831-1726-SM-EWROJ 20-29 years, male 72.6
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 71.7
GTEX-14E1K-1626-SM-664MO 50-59 years, male 71.4
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 70.8
GTEX-1AX9K-1626-SM-73KUS 50-59 years, male 70.6
GTEX-1R9JW-2126-SM-E76QT 30-39 years, female 70.2
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Colon - Transverse
Average nTPM: 36.8
Samples: 406

Max nTPM: 77.8
Min nTPM: 17.7
Std nTPM: 8.6
Median nTPM: 34.8
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 77.8
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 67.7
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 66.7
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 66.7
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 66.1
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 65.5
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 65.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 64.2
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 64.0
GTEX-1C64O-2326-SM-73KU8 60-69 years, male 61.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 60.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 94.8
FF:10014-101C5 62,83,84 years, mixed 94.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.