HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.6 nTPM
HPA:70.6 nTPM
GTEx:59.3 nTPM
FANTOM5:49.3 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:9.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049849
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.6
Sample id Sample description nTPM
Hippocampus
nTPM: 68.4
1898 Male, age 80, left hemisphere 77.3
2529 Female, age 94, left hemisphere 67.6
1855 Male, age 76, left hemisphere 67.4
2148 Female, age 91, left hemisphere 66.4
2621 Female, age 67, right hemisphere 66.4
1911 Female, age 85, right hemisphere 65.4
Dentate gyrus
nTPM: 69.0
2530 Female, age 94, left hemisphere 75.2
2010 Male, age 76, both hemispheres 73.2
1927 Female, age 91, both hemispheres 68.3
2246 Female, age 85, both hemispheres 66.7
2528 Male, age 74, both hemispheres 66.6
2531 Female, age 67, both hemispheres 64.0
Entorhinal gyrus
nTPM: 67.0
2764 Male, age 80, right hemisphere 68.9
1938 Female, age 85, left hemisphere 67.9
2117 Female, age 91, right hemisphere 67.8
2686 Male, age 75, right hemisphere 66.7
1787 Male, age 76, left hemisphere 65.6
2613 Female, age 94, left hemisphere 65.0
Hippocampus, CA1
nTPM: 70.6
2749 Male, age 80, left hemisphere 82.8
1873 Female, age 85, both hemispheres 70.5
2527 Male, age 74, both hemispheres 67.2
2045 Male, age 76, both hemispheres 66.5
2082 Female, age 91, right hemisphere 66.1
Hippocampus, CA2
nTPM: 69.2
1963 Male, age 80, left hemisphere 75.5
1892 Male, age 76, both hemispheres 74.2
2249 Male, age 74, both hemispheres 68.5
2437 Female, age 94, left hemisphere 66.6
1940 Female, age 85, left hemisphere 66.0
2113 Female, age 91, right hemisphere 64.6
Hippocampus, CA3
nTPM: 68.7
2137 Male, age 80, left hemisphere 74.6
1867 Male, age 76, both hemispheres 71.4
2436 Male, age 74, both hemispheres 71.0
1891 Female, age 85, both hemispheres 67.8
2861 Female, age 67, both hemispheres 64.2
2620 Female, age 94, left hemisphere 63.2
Parahippocampal cortex
nTPM: 66.2
1850 Male, age 80, both hemispheres 70.0
2018 Male, age 76, both hemispheres 68.3
1933 Female, age 85, both hemispheres 67.5
2245 Female, age 91, both hemispheres 67.5
1990 Female, age 91, right hemisphere 67.3
2250 Female, age 67, right hemisphere 66.3
2692 Male, age 74, both hemispheres 66.1
2532 Female, age 72, left hemisphere 65.5
2622 Female, age 67, right hemisphere 62.8
2693 Female, age 94, both hemispheres 60.8
Perirhinal gyrus
nTPM: 67.4
1847 Female, age 91, left hemisphere 70.4
1794 Male, age 80, right hemisphere 70.0
1841 Female, age 85, right hemisphere 67.4
2521 Female, age 94, right hemisphere 65.0
2848 Male, age 76, right hemisphere 64.3
Subiculum
nTPM: 66.1
1901 Male, age 80, both hemispheres 70.2
1977 Female, age 85, both hemispheres 67.9
2042 Male, age 76, both hemispheres 66.6
2619 Male, age 74, both hemispheres 64.4
2729 Female, age 91, right hemisphere 63.7
2438 Female, age 94, left hemisphere 63.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.3
Samples: 197

Max nTPM: 99.6
Min nTPM: 38.6
Std nTPM: 10.4
Median nTPM: 58.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 99.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 86.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 85.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 83.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 83.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 81.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 80.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 80.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 80.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 80.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.3
FF:10153-102I9 76 years, female 51.6
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.4
Sample A Female 9.4
Sample B Female 9.7
Sample C Male 10.8
Sample D Male 9.8
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 9.7
Sample C Male 9.0
Sample D Male 9.4
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 9.5
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 8.7
Sample C Male 9.5
Sample D Male 9.3
Ventral hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 10.3
Min nTPM: 9.2
Sample A Female 9.5
Sample B Female 9.2
Sample C Male 9.7
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.3
Sample A Male 9.9
Sample B Male 9.3
Sample C Female 8.3
Sample D Female 12.0
Hippocampal formation
nTPM: 8.6
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.0
Sample A Male 6.0
Sample B Male 8.1
Sample C Female 9.3
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
75043152 Antisense, RP_060412_05_B03, Mouse strain C57BL/6J (56 days, male) 0.8
72001867 Antisense, RP_050915_02_D10, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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