HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.0 nTPM
HPA:40.0 nTPM
GTEx:24.5 nTPM
FANTOM5:81.0 Scaled Tags Per Million
Pig:31.3 nTPM
Mouse:29.7 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029947Antibody HPA029949
Glial cells Not detectedLow
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.0
Sample id Sample description nTPM
Hippocampus
nTPM: 38.3
2529 Female, age 94, left hemisphere 45.4
1855 Male, age 76, left hemisphere 40.2
1898 Male, age 80, left hemisphere 39.9
1911 Female, age 85, right hemisphere 36.6
2148 Female, age 91, left hemisphere 36.1
2621 Female, age 67, right hemisphere 31.5
Dentate gyrus
nTPM: 31.3
2010 Male, age 76, both hemispheres 37.7
2246 Female, age 85, both hemispheres 36.1
2530 Female, age 94, left hemisphere 31.9
2528 Male, age 74, both hemispheres 31.2
1927 Female, age 91, both hemispheres 29.1
2531 Female, age 67, both hemispheres 21.6
Entorhinal gyrus
nTPM: 30.9
2117 Female, age 91, right hemisphere 37.7
1787 Male, age 76, left hemisphere 35.1
1938 Female, age 85, left hemisphere 32.4
2764 Male, age 80, right hemisphere 31.5
2686 Male, age 75, right hemisphere 29.6
2613 Female, age 94, left hemisphere 18.8
Hippocampus, CA1
nTPM: 40.0
2749 Male, age 80, left hemisphere 55.0
2527 Male, age 74, both hemispheres 45.2
1873 Female, age 85, both hemispheres 38.9
2082 Female, age 91, right hemisphere 35.8
2045 Male, age 76, both hemispheres 25.2
Hippocampus, CA2
nTPM: 32.7
1963 Male, age 80, left hemisphere 46.0
2113 Female, age 91, right hemisphere 37.9
2249 Male, age 74, both hemispheres 31.3
1940 Female, age 85, left hemisphere 28.6
2437 Female, age 94, left hemisphere 27.7
1892 Male, age 76, both hemispheres 24.5
Hippocampus, CA3
nTPM: 30.8
2137 Male, age 80, left hemisphere 37.1
1891 Female, age 85, both hemispheres 35.9
2861 Female, age 67, both hemispheres 31.2
1867 Male, age 76, both hemispheres 30.5
2436 Male, age 74, both hemispheres 28.1
2620 Female, age 94, left hemisphere 22.2
Parahippocampal cortex
nTPM: 29.1
2692 Male, age 74, both hemispheres 39.8
2018 Male, age 76, both hemispheres 31.7
2245 Female, age 91, both hemispheres 31.5
2622 Female, age 67, right hemisphere 31.4
1990 Female, age 91, right hemisphere 29.8
1933 Female, age 85, both hemispheres 28.9
2250 Female, age 67, right hemisphere 28.3
1850 Male, age 80, both hemispheres 25.2
2532 Female, age 72, left hemisphere 23.4
2693 Female, age 94, both hemispheres 21.4
Perirhinal gyrus
nTPM: 24.0
1847 Female, age 91, left hemisphere 26.2
1841 Female, age 85, right hemisphere 25.0
2521 Female, age 94, right hemisphere 23.4
1794 Male, age 80, right hemisphere 22.7
2848 Male, age 76, right hemisphere 22.6
Subiculum
nTPM: 35.5
2619 Male, age 74, both hemispheres 40.3
2438 Female, age 94, left hemisphere 35.8
2729 Female, age 91, right hemisphere 35.8
1901 Male, age 80, both hemispheres 35.6
2042 Male, age 76, both hemispheres 34.2
1977 Female, age 85, both hemispheres 31.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.5
Samples: 197

Max nTPM: 49.5
Min nTPM: 7.8
Std nTPM: 6.6
Median nTPM: 23.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 49.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 48.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 41.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 41.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 39.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 39.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 37.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 36.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 36.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 36.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 35.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.0
FF:10153-102I9 76 years, female 114.0
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 33.8
Min nTPM: 21.8
Sample A Female 33.8
Sample B Female 29.0
Sample C Male 31.9
Sample D Male 21.8
Entorhinal cortex
nTPM: 25.0
Samples: 4

Max nTPM: 29.2
Min nTPM: 21.5
Sample A Female 23.3
Sample B Female 29.2
Sample C Male 26.1
Sample D Male 21.5
Subiculum
nTPM: 28.7
Samples: 4

Max nTPM: 30.9
Min nTPM: 24.1
Sample A Female 30.9
Sample B Female 29.9
Sample C Male 29.9
Sample D Male 24.1
Ventral hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 37.0
Min nTPM: 28.0
Sample A Female 28.0
Sample B Female 28.7
Sample C Male 37.0
Sample D Male 31.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.8
Samples: 4

Max nTPM: 30.8
Min nTPM: 25.9
Sample A Male 30.7
Sample B Male 25.9
Sample C Female 27.6
Sample D Female 30.8
Hippocampal formation
nTPM: 29.7
Samples: 4

Max nTPM: 30.4
Min nTPM: 28.1
Sample A Male 28.1
Sample B Male 30.4
Sample C Female 30.0
Sample D Female 30.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
70301973 Antisense, RP_050607_03_C05, Mouse strain C57BL/6J (56 days, male) 0.9
71924225 Antisense, RP_050607_03_C05, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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