HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:23.8 nTPM
HPA:23.8 nTPM
GTEx:30.7 nTPM
FANTOM5:56.5 Scaled Tags Per Million
Pig:27.3 nTPM
Mouse:93.2 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.8
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
1898 Male, age 80, left hemisphere 23.2
2148 Female, age 91, left hemisphere 20.7
2621 Female, age 67, right hemisphere 20.3
1911 Female, age 85, right hemisphere 19.8
2529 Female, age 94, left hemisphere 18.7
1855 Male, age 76, left hemisphere 13.9
Dentate gyrus
nTPM: 20.5
1927 Female, age 91, both hemispheres 22.6
2530 Female, age 94, left hemisphere 22.1
2531 Female, age 67, both hemispheres 20.8
2246 Female, age 85, both hemispheres 20.7
2528 Male, age 74, both hemispheres 19.7
2010 Male, age 76, both hemispheres 17.1
Entorhinal gyrus
nTPM: 23.1
2686 Male, age 75, right hemisphere 27.2
2613 Female, age 94, left hemisphere 24.8
1938 Female, age 85, left hemisphere 22.3
2764 Male, age 80, right hemisphere 22.2
2117 Female, age 91, right hemisphere 21.4
1787 Male, age 76, left hemisphere 20.7
Hippocampus, CA1
nTPM: 21.6
2749 Male, age 80, left hemisphere 28.5
2527 Male, age 74, both hemispheres 24.1
1873 Female, age 85, both hemispheres 23.9
2082 Female, age 91, right hemisphere 19.9
2045 Male, age 76, both hemispheres 11.4
Hippocampus, CA2
nTPM: 22.9
1963 Male, age 80, left hemisphere 29.0
1892 Male, age 76, both hemispheres 26.4
2113 Female, age 91, right hemisphere 22.7
2249 Male, age 74, both hemispheres 20.1
2437 Female, age 94, left hemisphere 20.0
1940 Female, age 85, left hemisphere 19.4
Hippocampus, CA3
nTPM: 21.3
2436 Male, age 74, both hemispheres 23.8
2861 Female, age 67, both hemispheres 22.3
2137 Male, age 80, left hemisphere 22.2
1867 Male, age 76, both hemispheres 21.6
1891 Female, age 85, both hemispheres 19.5
2620 Female, age 94, left hemisphere 18.6
Parahippocampal cortex
nTPM: 23.0
2693 Female, age 94, both hemispheres 25.8
2532 Female, age 72, left hemisphere 24.9
2692 Male, age 74, both hemispheres 24.2
1850 Male, age 80, both hemispheres 24.0
2622 Female, age 67, right hemisphere 23.7
1933 Female, age 85, both hemispheres 23.6
2245 Female, age 91, both hemispheres 22.6
1990 Female, age 91, right hemisphere 22.4
2250 Female, age 67, right hemisphere 20.8
2018 Male, age 76, both hemispheres 17.9
Perirhinal gyrus
nTPM: 23.8
1841 Female, age 85, right hemisphere 25.7
2521 Female, age 94, right hemisphere 24.5
1847 Female, age 91, left hemisphere 23.2
2848 Male, age 76, right hemisphere 23.2
1794 Male, age 80, right hemisphere 22.4
Subiculum
nTPM: 21.5
2438 Female, age 94, left hemisphere 25.0
1977 Female, age 85, both hemispheres 24.9
2619 Male, age 74, both hemispheres 22.9
1901 Male, age 80, both hemispheres 20.9
2729 Female, age 91, right hemisphere 18.7
2042 Male, age 76, both hemispheres 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.7
Samples: 197

Max nTPM: 82.6
Min nTPM: 12.1
Std nTPM: 13.9
Median nTPM: 27.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 82.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 74.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 68.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 68.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 67.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 66.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 65.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 64.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 61.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 60.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 58.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.5
FF:10153-102I9 76 years, female 56.6
FF:10169-103B7 60 years, female 56.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.3
Samples: 4

Max nTPM: 31.3
Min nTPM: 24.7
Sample A Female 31.3
Sample B Female 25.0
Sample C Male 28.1
Sample D Male 24.7
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 29.9
Min nTPM: 21.6
Sample A Female 29.9
Sample B Female 29.9
Sample C Male 21.6
Sample D Male 23.5
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 29.6
Min nTPM: 20.9
Sample A Female 29.6
Sample B Female 21.4
Sample C Male 20.9
Sample D Male 22.2
Ventral hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 26.7
Min nTPM: 19.2
Sample A Female 26.4
Sample B Female 19.2
Sample C Male 26.7
Sample D Male 26.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 93.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.2
Samples: 4

Max nTPM: 99.1
Min nTPM: 81.6
Sample A Male 95.8
Sample B Male 99.1
Sample C Female 96.3
Sample D Female 81.6
Hippocampal formation
nTPM: 88.1
Samples: 4

Max nTPM: 102.5
Min nTPM: 80.7
Sample A Male 102.5
Sample B Male 82.1
Sample C Female 80.7
Sample D Female 86.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
74800954 Antisense, RP_060315_02_A11, Mouse strain C57BL/6J (56 days, male) 7.7
68193058 Antisense, RP_040831_01_D05, Mouse strain C57BL/6J (56 days, male) 4.8

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