HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.2 nTPM
HPA:50.2 nTPM
GTEx:72.4 nTPM
FANTOM5:105.4 Scaled Tags Per Million
Pig:152.0 nTPM
Mouse:179.3 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050530Antibody HPA054147
Glial cells LowNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.2
Sample id Sample description nTPM
Hippocampus
nTPM: 33.8
1898 Male, age 80, left hemisphere 50.5
2621 Female, age 67, right hemisphere 48.5
1855 Male, age 76, left hemisphere 33.2
1911 Female, age 85, right hemisphere 33.2
2148 Female, age 91, left hemisphere 30.0
2529 Female, age 94, left hemisphere 7.5
Dentate gyrus
nTPM: 35.8
1927 Female, age 91, both hemispheres 75.4
2010 Male, age 76, both hemispheres 38.2
2531 Female, age 67, both hemispheres 36.1
2246 Female, age 85, both hemispheres 32.5
2530 Female, age 94, left hemisphere 17.5
2528 Male, age 74, both hemispheres 14.8
Entorhinal gyrus
nTPM: 26.3
1938 Female, age 85, left hemisphere 40.3
2613 Female, age 94, left hemisphere 37.9
1787 Male, age 76, left hemisphere 33.4
2764 Male, age 80, right hemisphere 29.8
2686 Male, age 75, right hemisphere 15.0
2117 Female, age 91, right hemisphere 1.4
Hippocampus, CA1
nTPM: 50.2
2749 Male, age 80, left hemisphere 127.6
1873 Female, age 85, both hemispheres 49.3
2045 Male, age 76, both hemispheres 36.7
2527 Male, age 74, both hemispheres 28.1
2082 Female, age 91, right hemisphere 9.5
Hippocampus, CA2
nTPM: 30.9
1892 Male, age 76, both hemispheres 64.7
1963 Male, age 80, left hemisphere 51.0
2249 Male, age 74, both hemispheres 22.7
2437 Female, age 94, left hemisphere 17.5
1940 Female, age 85, left hemisphere 16.0
2113 Female, age 91, right hemisphere 13.4
Hippocampus, CA3
nTPM: 49.2
2137 Male, age 80, left hemisphere 117.0
2620 Female, age 94, left hemisphere 47.8
1867 Male, age 76, both hemispheres 44.2
2861 Female, age 67, both hemispheres 33.3
2436 Male, age 74, both hemispheres 26.9
1891 Female, age 85, both hemispheres 26.1
Parahippocampal cortex
nTPM: 30.4
2245 Female, age 91, both hemispheres 51.3
1850 Male, age 80, both hemispheres 42.9
1990 Female, age 91, right hemisphere 39.7
2250 Female, age 67, right hemisphere 35.7
2693 Female, age 94, both hemispheres 29.2
1933 Female, age 85, both hemispheres 27.5
2532 Female, age 72, left hemisphere 25.6
2622 Female, age 67, right hemisphere 24.7
2018 Male, age 76, both hemispheres 16.6
2692 Male, age 74, both hemispheres 11.2
Perirhinal gyrus
nTPM: 41.2
1847 Female, age 91, left hemisphere 68.4
1794 Male, age 80, right hemisphere 41.8
2521 Female, age 94, right hemisphere 37.8
1841 Female, age 85, right hemisphere 35.2
2848 Male, age 76, right hemisphere 23.0
Subiculum
nTPM: 23.8
1901 Male, age 80, both hemispheres 54.1
1977 Female, age 85, both hemispheres 31.1
2042 Male, age 76, both hemispheres 24.9
2438 Female, age 94, left hemisphere 15.5
2619 Male, age 74, both hemispheres 12.3
2729 Female, age 91, right hemisphere 4.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.4
Samples: 197

Max nTPM: 318.0
Min nTPM: 2.0
Std nTPM: 49.5
Median nTPM: 69.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 318.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 202.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 197.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 195.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 182.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 176.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 170.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 166.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 165.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 164.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 155.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.4
FF:10169-103B7 60 years, female 141.2
FF:10153-102I9 76 years, female 69.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 152.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 141.2
Samples: 4

Max nTPM: 176.9
Min nTPM: 106.6
Sample A Female 176.9
Sample B Female 163.4
Sample C Male 106.6
Sample D Male 117.7
Entorhinal cortex
nTPM: 152.0
Samples: 4

Max nTPM: 171.6
Min nTPM: 132.0
Sample A Female 171.6
Sample B Female 161.7
Sample C Male 142.7
Sample D Male 132.0
Subiculum
nTPM: 82.9
Samples: 4

Max nTPM: 105.4
Min nTPM: 70.4
Sample A Female 105.4
Sample B Female 70.4
Sample C Male 70.8
Sample D Male 84.8
Ventral hippocampus
nTPM: 105.3
Samples: 4

Max nTPM: 171.1
Min nTPM: 76.7
Sample A Female 89.4
Sample B Female 76.7
Sample C Male 84.1
Sample D Male 171.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 179.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 152.8
Samples: 4

Max nTPM: 161.5
Min nTPM: 142.6
Sample A Male 147.0
Sample B Male 161.5
Sample C Female 142.6
Sample D Female 160.0
Hippocampal formation
nTPM: 179.3
Samples: 4

Max nTPM: 212.2
Min nTPM: 156.2
Sample A Male 167.6
Sample B Male 181.1
Sample C Female 212.2
Sample D Female 156.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
69015158 Antisense, RP_050310_02_D09, Mouse strain C57BL/6J (56 days, male) 12.0
70436737 Antisense, RP_050310_02_D09, Mouse strain C57BL/6J (56 days, male) 8.4

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