HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.7 nTPM
HPA:7.7 nTPM
GTEx:10.6 nTPM
FANTOM5:49.7 Scaled Tags Per Million
Pig:21.4 nTPM
Mouse:21.9 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037518Antibody HPA037519
Glial cells Not detectedMedium
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.7
Sample id Sample description nTPM
Hippocampus
nTPM: 6.9
2621 Female, age 67, right hemisphere 8.4
2529 Female, age 94, left hemisphere 7.4
1911 Female, age 85, right hemisphere 7.1
2148 Female, age 91, left hemisphere 7.1
1898 Male, age 80, left hemisphere 5.9
1855 Male, age 76, left hemisphere 5.4
Dentate gyrus
nTPM: 7.4
2528 Male, age 74, both hemispheres 9.1
2531 Female, age 67, both hemispheres 8.5
2246 Female, age 85, both hemispheres 7.2
1927 Female, age 91, both hemispheres 6.9
2530 Female, age 94, left hemisphere 6.6
2010 Male, age 76, both hemispheres 6.0
Entorhinal gyrus
nTPM: 7.5
2613 Female, age 94, left hemisphere 8.8
1938 Female, age 85, left hemisphere 8.7
2764 Male, age 80, right hemisphere 8.1
2117 Female, age 91, right hemisphere 7.1
2686 Male, age 75, right hemisphere 6.5
1787 Male, age 76, left hemisphere 5.7
Hippocampus, CA1
nTPM: 6.8
2749 Male, age 80, left hemisphere 7.7
2082 Female, age 91, right hemisphere 6.9
2527 Male, age 74, both hemispheres 6.7
1873 Female, age 85, both hemispheres 6.6
2045 Male, age 76, both hemispheres 6.0
Hippocampus, CA2
nTPM: 6.9
1963 Male, age 80, left hemisphere 9.0
2249 Male, age 74, both hemispheres 7.3
1940 Female, age 85, left hemisphere 6.7
2113 Female, age 91, right hemisphere 6.2
2437 Female, age 94, left hemisphere 6.2
1892 Male, age 76, both hemispheres 5.8
Hippocampus, CA3
nTPM: 7.0
2137 Male, age 80, left hemisphere 7.7
2436 Male, age 74, both hemispheres 7.6
2620 Female, age 94, left hemisphere 7.6
2861 Female, age 67, both hemispheres 6.7
1867 Male, age 76, both hemispheres 6.2
1891 Female, age 85, both hemispheres 6.0
Parahippocampal cortex
nTPM: 7.7
2693 Female, age 94, both hemispheres 8.5
2245 Female, age 91, both hemispheres 8.4
1850 Male, age 80, both hemispheres 8.1
1933 Female, age 85, both hemispheres 7.7
1990 Female, age 91, right hemisphere 7.7
2692 Male, age 74, both hemispheres 7.7
2250 Female, age 67, right hemisphere 7.5
2622 Female, age 67, right hemisphere 7.3
2018 Male, age 76, both hemispheres 7.0
2532 Female, age 72, left hemisphere 6.7
Perirhinal gyrus
nTPM: 7.6
2521 Female, age 94, right hemisphere 9.2
1841 Female, age 85, right hemisphere 7.7
2848 Male, age 76, right hemisphere 7.7
1794 Male, age 80, right hemisphere 6.9
1847 Female, age 91, left hemisphere 6.6
Subiculum
nTPM: 6.9
2438 Female, age 94, left hemisphere 7.7
2619 Male, age 74, both hemispheres 7.1
1901 Male, age 80, both hemispheres 7.0
1977 Female, age 85, both hemispheres 7.0
2729 Female, age 91, right hemisphere 6.7
2042 Male, age 76, both hemispheres 6.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.6
Samples: 197

Max nTPM: 16.3
Min nTPM: 5.8
Std nTPM: 1.7
Median nTPM: 10.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 16.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 15.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 15.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 14.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 14.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 14.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 14.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 13.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 13.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 13.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 13.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.7
FF:10153-102I9 76 years, female 59.6
FF:10169-103B7 60 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 24.8
Min nTPM: 17.8
Sample A Female 24.8
Sample B Female 22.8
Sample C Male 20.3
Sample D Male 17.8
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 20.4
Min nTPM: 18.1
Sample A Female 20.4
Sample B Female 20.4
Sample C Male 19.6
Sample D Male 18.1
Subiculum
nTPM: 21.1
Samples: 4

Max nTPM: 24.7
Min nTPM: 17.3
Sample A Female 24.7
Sample B Female 22.0
Sample C Male 20.3
Sample D Male 17.3
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 23.8
Min nTPM: 19.0
Sample A Female 19.6
Sample B Female 19.0
Sample C Male 23.8
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 23.9
Min nTPM: 18.9
Sample A Male 18.9
Sample B Male 21.1
Sample C Female 23.9
Sample D Female 23.6
Hippocampal formation
nTPM: 21.9
Samples: 4

Max nTPM: 22.9
Min nTPM: 20.2
Sample A Male 22.4
Sample B Male 22.9
Sample C Female 21.9
Sample D Female 20.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
71724792 Antisense, RP_050921_01_F09, Mouse strain C57BL/6J (56 days, male) 2.5

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