HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.5 nTPM
HPA:11.5 nTPM
GTEx:14.3 nTPM
FANTOM5:9.5 Scaled Tags Per Million
Pig:4.0 nTPM
Mouse:9.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053243
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.5
Sample id Sample description nTPM
Hippocampus
nTPM: 10.8
2529 Female, age 94, left hemisphere 11.9
1911 Female, age 85, right hemisphere 11.1
1855 Male, age 76, left hemisphere 10.6
1898 Male, age 80, left hemisphere 10.5
2148 Female, age 91, left hemisphere 10.5
2621 Female, age 67, right hemisphere 10.5
Dentate gyrus
nTPM: 11.2
2530 Female, age 94, left hemisphere 13.4
2010 Male, age 76, both hemispheres 13.1
2528 Male, age 74, both hemispheres 10.4
2531 Female, age 67, both hemispheres 10.2
2246 Female, age 85, both hemispheres 10.1
1927 Female, age 91, both hemispheres 10.0
Entorhinal gyrus
nTPM: 10.9
2117 Female, age 91, right hemisphere 12.5
1787 Male, age 76, left hemisphere 11.2
2686 Male, age 75, right hemisphere 11.0
2764 Male, age 80, right hemisphere 10.4
2613 Female, age 94, left hemisphere 10.2
1938 Female, age 85, left hemisphere 10.1
Hippocampus, CA1
nTPM: 10.9
2045 Male, age 76, both hemispheres 12.7
1873 Female, age 85, both hemispheres 10.8
2749 Male, age 80, left hemisphere 10.5
2527 Male, age 74, both hemispheres 10.4
2082 Female, age 91, right hemisphere 10.1
Hippocampus, CA2
nTPM: 10.9
2437 Female, age 94, left hemisphere 11.4
1963 Male, age 80, left hemisphere 11.3
2249 Male, age 74, both hemispheres 11.3
1892 Male, age 76, both hemispheres 10.7
1940 Female, age 85, left hemisphere 10.3
2113 Female, age 91, right hemisphere 10.1
Hippocampus, CA3
nTPM: 10.9
1867 Male, age 76, both hemispheres 13.4
1891 Female, age 85, both hemispheres 11.3
2620 Female, age 94, left hemisphere 10.6
2137 Male, age 80, left hemisphere 10.0
2436 Male, age 74, both hemispheres 10.0
2861 Female, age 67, both hemispheres 10.0
Parahippocampal cortex
nTPM: 10.7
2018 Male, age 76, both hemispheres 15.0
2532 Female, age 72, left hemisphere 11.2
2692 Male, age 74, both hemispheres 10.8
1990 Female, age 91, right hemisphere 10.5
2245 Female, age 91, both hemispheres 10.4
1850 Male, age 80, both hemispheres 10.2
1933 Female, age 85, both hemispheres 10.1
2622 Female, age 67, right hemisphere 9.9
2693 Female, age 94, both hemispheres 9.8
2250 Female, age 67, right hemisphere 9.3
Perirhinal gyrus
nTPM: 9.9
2848 Male, age 76, right hemisphere 10.5
2521 Female, age 94, right hemisphere 10.1
1794 Male, age 80, right hemisphere 9.7
1847 Female, age 91, left hemisphere 9.6
1841 Female, age 85, right hemisphere 9.5
Subiculum
nTPM: 11.5
2042 Male, age 76, both hemispheres 14.7
1901 Male, age 80, both hemispheres 11.3
1977 Female, age 85, both hemispheres 11.1
2619 Male, age 74, both hemispheres 11.0
2438 Female, age 94, left hemisphere 10.5
2729 Female, age 91, right hemisphere 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.3
Samples: 197

Max nTPM: 75.4
Min nTPM: 4.2
Std nTPM: 9.8
Median nTPM: 12.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 75.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 62.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 62.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 44.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 43.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 42.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 38.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 34.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 33.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 33.3
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 33.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.5
FF:10169-103B7 60 years, female 10.4
FF:10153-102I9 76 years, female 8.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 3.9
Min nTPM: 3.0
Sample A Female 3.1
Sample B Female 3.6
Sample C Male 3.0
Sample D Male 3.9
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.6
Sample A Female 4.5
Sample B Female 3.6
Sample C Male 4.0
Sample D Male 4.1
Subiculum
nTPM: 3.7
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.1
Sample A Female 4.1
Sample B Female 3.1
Sample C Male 4.1
Sample D Male 3.4
Ventral hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.1
Sample A Female 3.2
Sample B Female 3.6
Sample C Male 4.9
Sample D Male 3.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.5
Samples: 4

Max nTPM: 10.1
Min nTPM: 9.3
Sample A Male 9.4
Sample B Male 9.3
Sample C Female 9.3
Sample D Female 10.1
Hippocampal formation
nTPM: 8.8
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.0
Sample A Male 9.3
Sample B Male 9.1
Sample C Female 8.0
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73584735 Antisense, RP_051206_01_A03, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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