HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.4 nTPM
HPA:34.4 nTPM
GTEx:29.7 nTPM
FANTOM5:79.5 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:10.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004526
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.8
2529 Female, age 94, left hemisphere 36.2
1911 Female, age 85, right hemisphere 35.0
1855 Male, age 76, left hemisphere 34.1
1898 Male, age 80, left hemisphere 31.4
2148 Female, age 91, left hemisphere 30.9
2621 Female, age 67, right hemisphere 28.9
Dentate gyrus
nTPM: 29.1
2246 Female, age 85, both hemispheres 31.7
2528 Male, age 74, both hemispheres 31.2
2010 Male, age 76, both hemispheres 30.6
2530 Female, age 94, left hemisphere 29.0
1927 Female, age 91, both hemispheres 26.8
2531 Female, age 67, both hemispheres 25.6
Entorhinal gyrus
nTPM: 31.8
2117 Female, age 91, right hemisphere 41.1
1938 Female, age 85, left hemisphere 33.2
2686 Male, age 75, right hemisphere 33.1
2764 Male, age 80, right hemisphere 28.9
1787 Male, age 76, left hemisphere 28.4
2613 Female, age 94, left hemisphere 25.9
Hippocampus, CA1
nTPM: 29.9
2527 Male, age 74, both hemispheres 35.3
1873 Female, age 85, both hemispheres 31.2
2082 Female, age 91, right hemisphere 30.9
2045 Male, age 76, both hemispheres 28.6
2749 Male, age 80, left hemisphere 23.8
Hippocampus, CA2
nTPM: 30.4
2113 Female, age 91, right hemisphere 33.6
2249 Male, age 74, both hemispheres 32.5
1963 Male, age 80, left hemisphere 30.7
1940 Female, age 85, left hemisphere 30.5
2437 Female, age 94, left hemisphere 29.2
1892 Male, age 76, both hemispheres 25.9
Hippocampus, CA3
nTPM: 28.3
1891 Female, age 85, both hemispheres 35.7
2436 Male, age 74, both hemispheres 31.8
1867 Male, age 76, both hemispheres 30.0
2861 Female, age 67, both hemispheres 25.7
2137 Male, age 80, left hemisphere 23.9
2620 Female, age 94, left hemisphere 22.7
Parahippocampal cortex
nTPM: 31.7
2692 Male, age 74, both hemispheres 37.5
1933 Female, age 85, both hemispheres 33.4
1990 Female, age 91, right hemisphere 31.9
2250 Female, age 67, right hemisphere 31.7
2018 Male, age 76, both hemispheres 31.6
2622 Female, age 67, right hemisphere 30.4
1850 Male, age 80, both hemispheres 30.2
2245 Female, age 91, both hemispheres 30.2
2693 Female, age 94, both hemispheres 30.1
2532 Female, age 72, left hemisphere 29.4
Perirhinal gyrus
nTPM: 28.6
2521 Female, age 94, right hemisphere 29.8
1847 Female, age 91, left hemisphere 29.5
1841 Female, age 85, right hemisphere 28.6
2848 Male, age 76, right hemisphere 27.9
1794 Male, age 80, right hemisphere 27.0
Subiculum
nTPM: 34.4
2729 Female, age 91, right hemisphere 36.5
2042 Male, age 76, both hemispheres 34.9
2438 Female, age 94, left hemisphere 34.9
2619 Male, age 74, both hemispheres 34.7
1901 Male, age 80, both hemispheres 32.9
1977 Female, age 85, both hemispheres 32.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.7
Samples: 197

Max nTPM: 60.1
Min nTPM: 9.8
Std nTPM: 11.1
Median nTPM: 27.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 60.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 59.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 58.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 57.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 55.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 54.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 54.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 54.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 53.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 53.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 52.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.5
FF:10153-102I9 76 years, female 95.2
FF:10169-103B7 60 years, female 63.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.6
Samples: 4

Max nTPM: 39.2
Min nTPM: 17.4
Sample A Female 39.2
Sample B Female 21.5
Sample C Male 36.4
Sample D Male 17.4
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 24.8
Min nTPM: 17.7
Sample A Female 19.7
Sample B Female 24.8
Sample C Male 20.1
Sample D Male 17.7
Subiculum
nTPM: 24.3
Samples: 4

Max nTPM: 26.6
Min nTPM: 22.3
Sample A Female 26.6
Sample B Female 24.4
Sample C Male 22.3
Sample D Male 24.0
Ventral hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 27.3
Min nTPM: 21.1
Sample A Female 27.3
Sample B Female 21.1
Sample C Male 24.3
Sample D Male 26.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.2
Sample A Male 10.5
Sample B Male 8.7
Sample C Female 9.6
Sample D Female 6.2
Hippocampal formation
nTPM: 10.9
Samples: 4

Max nTPM: 13.0
Min nTPM: 8.5
Sample A Male 8.5
Sample B Male 9.8
Sample C Female 13.0
Sample D Female 12.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
76003323 Antisense, RP_060608_02_B02, Mouse strain C57BL/6J (56 days, male) 0.2

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