HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.0 nTPM
HPA:61.0 nTPM
GTEx:61.3 nTPM
FANTOM5:72.6 Scaled Tags Per Million
Pig:42.3 nTPM
Mouse:13.4 nTPM
Allen mouse:21.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074057
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.0
Sample id Sample description nTPM
Hippocampus
nTPM: 59.6
2529 Female, age 94, left hemisphere 65.5
2148 Female, age 91, left hemisphere 62.4
2621 Female, age 67, right hemisphere 61.4
1911 Female, age 85, right hemisphere 60.4
1855 Male, age 76, left hemisphere 54.0
1898 Male, age 80, left hemisphere 54.0
Dentate gyrus
nTPM: 59.6
2530 Female, age 94, left hemisphere 70.4
2531 Female, age 67, both hemispheres 66.7
2528 Male, age 74, both hemispheres 58.0
1927 Female, age 91, both hemispheres 54.9
2010 Male, age 76, both hemispheres 54.6
2246 Female, age 85, both hemispheres 53.1
Entorhinal gyrus
nTPM: 61.0
2686 Male, age 75, right hemisphere 71.3
2117 Female, age 91, right hemisphere 69.5
2764 Male, age 80, right hemisphere 59.3
2613 Female, age 94, left hemisphere 58.0
1787 Male, age 76, left hemisphere 56.6
1938 Female, age 85, left hemisphere 51.1
Hippocampus, CA1
nTPM: 53.5
2082 Female, age 91, right hemisphere 55.8
2527 Male, age 74, both hemispheres 55.7
1873 Female, age 85, both hemispheres 54.6
2045 Male, age 76, both hemispheres 50.9
2749 Male, age 80, left hemisphere 50.7
Hippocampus, CA2
nTPM: 56.1
1963 Male, age 80, left hemisphere 65.3
2437 Female, age 94, left hemisphere 59.5
2113 Female, age 91, right hemisphere 58.7
1940 Female, age 85, left hemisphere 53.7
1892 Male, age 76, both hemispheres 50.1
2249 Male, age 74, both hemispheres 49.3
Hippocampus, CA3
nTPM: 55.5
2861 Female, age 67, both hemispheres 72.1
1891 Female, age 85, both hemispheres 58.1
2620 Female, age 94, left hemisphere 57.2
1867 Male, age 76, both hemispheres 51.2
2137 Male, age 80, left hemisphere 50.1
2436 Male, age 74, both hemispheres 44.1
Parahippocampal cortex
nTPM: 53.9
2692 Male, age 74, both hemispheres 63.3
2622 Female, age 67, right hemisphere 60.9
2245 Female, age 91, both hemispheres 57.8
2532 Female, age 72, left hemisphere 55.1
1990 Female, age 91, right hemisphere 54.6
2018 Male, age 76, both hemispheres 52.3
1933 Female, age 85, both hemispheres 50.2
1850 Male, age 80, both hemispheres 48.9
2250 Female, age 67, right hemisphere 48.3
2693 Female, age 94, both hemispheres 47.1
Perirhinal gyrus
nTPM: 48.3
1794 Male, age 80, right hemisphere 51.0
1847 Female, age 91, left hemisphere 50.7
2848 Male, age 76, right hemisphere 50.0
2521 Female, age 94, right hemisphere 45.8
1841 Female, age 85, right hemisphere 44.1
Subiculum
nTPM: 59.4
2438 Female, age 94, left hemisphere 64.2
2729 Female, age 91, right hemisphere 63.2
2619 Male, age 74, both hemispheres 59.6
2042 Male, age 76, both hemispheres 58.4
1901 Male, age 80, both hemispheres 57.9
1977 Female, age 85, both hemispheres 53.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.3
Samples: 197

Max nTPM: 179.1
Min nTPM: 15.0
Std nTPM: 26.3
Median nTPM: 55.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 179.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 157.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 146.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 146.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 140.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 135.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 134.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 116.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 115.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 109.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 104.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.6
FF:10153-102I9 76 years, female 98.1
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.3
Samples: 4

Max nTPM: 51.6
Min nTPM: 32.4
Sample A Female 51.6
Sample B Female 38.2
Sample C Male 46.9
Sample D Male 32.4
Entorhinal cortex
nTPM: 42.0
Samples: 4

Max nTPM: 44.0
Min nTPM: 38.1
Sample A Female 42.5
Sample B Female 43.2
Sample C Male 44.0
Sample D Male 38.1
Subiculum
nTPM: 34.1
Samples: 4

Max nTPM: 43.6
Min nTPM: 30.3
Sample A Female 43.6
Sample B Female 31.3
Sample C Male 31.1
Sample D Male 30.3
Ventral hippocampus
nTPM: 38.1
Samples: 4

Max nTPM: 44.6
Min nTPM: 27.7
Sample A Female 37.8
Sample B Female 27.7
Sample C Male 44.6
Sample D Male 42.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.5
Sample A Male 14.2
Sample B Male 13.8
Sample C Female 13.2
Sample D Female 12.5
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.8
Sample A Male 12.2
Sample B Male 13.0
Sample C Female 14.2
Sample D Female 11.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.5
73584717 Antisense, RP_051121_03_H06, Mouse strain C57BL/6J (56 days, male) 21.5

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