HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.4 nTPM
HPA:11.4 nTPM
GTEx:10.4 nTPM
FANTOM5:65.8 Scaled Tags Per Million
Pig:10.8 nTPM
Mouse:17.0 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047088
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
1855 Male, age 76, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.5
2529 Female, age 94, left hemisphere 11.2
1911 Female, age 85, right hemisphere 10.9
2621 Female, age 67, right hemisphere 10.6
2148 Female, age 91, left hemisphere 10.3
Dentate gyrus
nTPM: 10.7
2528 Male, age 74, both hemispheres 11.7
2010 Male, age 76, both hemispheres 11.6
2246 Female, age 85, both hemispheres 10.9
1927 Female, age 91, both hemispheres 10.8
2530 Female, age 94, left hemisphere 10.5
2531 Female, age 67, both hemispheres 8.6
Entorhinal gyrus
nTPM: 9.6
2117 Female, age 91, right hemisphere 11.9
1787 Male, age 76, left hemisphere 10.7
1938 Female, age 85, left hemisphere 10.0
2613 Female, age 94, left hemisphere 8.6
2686 Male, age 75, right hemisphere 8.3
2764 Male, age 80, right hemisphere 8.2
Hippocampus, CA1
nTPM: 10.6
2082 Female, age 91, right hemisphere 11.4
2527 Male, age 74, both hemispheres 11.1
2045 Male, age 76, both hemispheres 11.0
1873 Female, age 85, both hemispheres 10.8
2749 Male, age 80, left hemisphere 8.8
Hippocampus, CA2
nTPM: 11.2
2249 Male, age 74, both hemispheres 12.8
1940 Female, age 85, left hemisphere 12.6
2113 Female, age 91, right hemisphere 11.4
1892 Male, age 76, both hemispheres 10.5
1963 Male, age 80, left hemisphere 10.1
2437 Female, age 94, left hemisphere 9.9
Hippocampus, CA3
nTPM: 10.4
2436 Male, age 74, both hemispheres 12.0
1867 Male, age 76, both hemispheres 11.4
1891 Female, age 85, both hemispheres 11.3
2861 Female, age 67, both hemispheres 9.9
2137 Male, age 80, left hemisphere 9.0
2620 Female, age 94, left hemisphere 9.0
Parahippocampal cortex
nTPM: 10.2
2250 Female, age 67, right hemisphere 13.4
2018 Male, age 76, both hemispheres 10.8
2693 Female, age 94, both hemispheres 10.5
1990 Female, age 91, right hemisphere 10.1
2692 Male, age 74, both hemispheres 10.1
2245 Female, age 91, both hemispheres 9.9
1850 Male, age 80, both hemispheres 9.7
1933 Female, age 85, both hemispheres 9.5
2532 Female, age 72, left hemisphere 9.5
2622 Female, age 67, right hemisphere 8.7
Perirhinal gyrus
nTPM: 10.2
2848 Male, age 76, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.6
2521 Female, age 94, right hemisphere 10.3
1847 Female, age 91, left hemisphere 9.7
1794 Male, age 80, right hemisphere 9.4
Subiculum
nTPM: 10.9
2729 Female, age 91, right hemisphere 13.2
2042 Male, age 76, both hemispheres 12.1
2619 Male, age 74, both hemispheres 10.9
1901 Male, age 80, both hemispheres 9.9
1977 Female, age 85, both hemispheres 9.8
2438 Female, age 94, left hemisphere 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 21.6
Min nTPM: 6.0
Std nTPM: 2.8
Median nTPM: 9.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 21.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 19.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 18.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 18.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 17.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 17.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 16.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 16.7
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 16.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 15.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 15.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.8
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 57.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.0
Sample A Female 12.2
Sample B Female 9.6
Sample C Male 12.7
Sample D Male 8.0
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.5
Sample A Female 9.1
Sample B Female 10.0
Sample C Male 10.0
Sample D Male 6.5
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.7
Sample A Female 12.7
Sample B Female 10.8
Sample C Male 8.7
Sample D Male 10.9
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 10.3
Min nTPM: 9.2
Sample A Female 10.3
Sample B Female 10.1
Sample C Male 9.2
Sample D Male 9.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 18.1
Min nTPM: 16.2
Sample A Male 18.1
Sample B Male 16.2
Sample C Female 17.3
Sample D Female 16.4
Hippocampal formation
nTPM: 16.1
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.1
Sample A Male 16.7
Sample B Male 16.4
Sample C Female 14.1
Sample D Female 17.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
75991092 Antisense, RP_060608_01_H07, Mouse strain C57BL/6J (56 days, male) 0.8

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