HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.3 nTPM
HPA:30.3 nTPM
GTEx:17.3 nTPM
FANTOM5:72.8 Scaled Tags Per Million
Pig:56.9 nTPM
Mouse:142.4 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022151
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
1898 Male, age 80, left hemisphere 28.6
1855 Male, age 76, left hemisphere 16.5
2148 Female, age 91, left hemisphere 10.3
1911 Female, age 85, right hemisphere 10.2
2621 Female, age 67, right hemisphere 8.7
2529 Female, age 94, left hemisphere 3.8
Dentate gyrus
nTPM: 13.3
1927 Female, age 91, both hemispheres 21.9
2010 Male, age 76, both hemispheres 20.9
2246 Female, age 85, both hemispheres 18.3
2530 Female, age 94, left hemisphere 8.6
2531 Female, age 67, both hemispheres 5.3
2528 Male, age 74, both hemispheres 4.6
Entorhinal gyrus
nTPM: 18.6
2764 Male, age 80, right hemisphere 26.2
1938 Female, age 85, left hemisphere 25.9
1787 Male, age 76, left hemisphere 21.5
2613 Female, age 94, left hemisphere 19.5
2686 Male, age 75, right hemisphere 10.9
2117 Female, age 91, right hemisphere 7.5
Hippocampus, CA1
nTPM: 16.5
2749 Male, age 80, left hemisphere 34.8
1873 Female, age 85, both hemispheres 18.4
2082 Female, age 91, right hemisphere 14.1
2045 Male, age 76, both hemispheres 10.5
2527 Male, age 74, both hemispheres 5.0
Hippocampus, CA2
nTPM: 16.4
1892 Male, age 76, both hemispheres 38.1
1963 Male, age 80, left hemisphere 22.6
1940 Female, age 85, left hemisphere 13.9
2113 Female, age 91, right hemisphere 10.5
2437 Female, age 94, left hemisphere 8.6
2249 Male, age 74, both hemispheres 4.9
Hippocampus, CA3
nTPM: 13.7
2137 Male, age 80, left hemisphere 26.9
1867 Male, age 76, both hemispheres 23.9
1891 Female, age 85, both hemispheres 16.0
2620 Female, age 94, left hemisphere 6.8
2861 Female, age 67, both hemispheres 4.5
2436 Male, age 74, both hemispheres 4.3
Parahippocampal cortex
nTPM: 16.8
1850 Male, age 80, both hemispheres 36.2
1990 Female, age 91, right hemisphere 22.0
1933 Female, age 85, both hemispheres 21.9
2532 Female, age 72, left hemisphere 18.1
2245 Female, age 91, both hemispheres 16.1
2018 Male, age 76, both hemispheres 15.8
2693 Female, age 94, both hemispheres 14.6
2250 Female, age 67, right hemisphere 8.3
2622 Female, age 67, right hemisphere 8.2
2692 Male, age 74, both hemispheres 6.4
Perirhinal gyrus
nTPM: 30.3
1794 Male, age 80, right hemisphere 39.3
1847 Female, age 91, left hemisphere 36.7
1841 Female, age 85, right hemisphere 29.9
2848 Male, age 76, right hemisphere 25.9
2521 Female, age 94, right hemisphere 19.8
Subiculum
nTPM: 14.2
1901 Male, age 80, both hemispheres 24.0
1977 Female, age 85, both hemispheres 23.5
2438 Female, age 94, left hemisphere 15.1
2042 Male, age 76, both hemispheres 12.3
2729 Female, age 91, right hemisphere 5.6
2619 Male, age 74, both hemispheres 4.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.3
Samples: 197

Max nTPM: 64.7
Min nTPM: 1.8
Std nTPM: 9.9
Median nTPM: 15.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 64.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 61.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 53.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 42.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 36.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 35.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 34.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 33.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 32.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 31.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.8
FF:10169-103B7 60 years, female 92.0
FF:10153-102I9 76 years, female 53.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.2
Samples: 4

Max nTPM: 71.5
Min nTPM: 38.1
Sample A Female 57.6
Sample B Female 57.6
Sample C Male 71.5
Sample D Male 38.1
Entorhinal cortex
nTPM: 56.9
Samples: 4

Max nTPM: 60.5
Min nTPM: 49.6
Sample A Female 57.4
Sample B Female 49.6
Sample C Male 60.1
Sample D Male 60.5
Subiculum
nTPM: 55.5
Samples: 4

Max nTPM: 67.2
Min nTPM: 47.2
Sample A Female 67.2
Sample B Female 48.3
Sample C Male 59.3
Sample D Male 47.2
Ventral hippocampus
nTPM: 54.5
Samples: 4

Max nTPM: 71.3
Min nTPM: 44.8
Sample A Female 71.3
Sample B Female 44.8
Sample C Male 52.2
Sample D Male 49.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 142.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 142.4
Samples: 4

Max nTPM: 156.4
Min nTPM: 120.3
Sample A Male 120.3
Sample B Male 152.9
Sample C Female 140.1
Sample D Female 156.4
Hippocampal formation
nTPM: 125.1
Samples: 4

Max nTPM: 144.3
Min nTPM: 108.4
Sample A Male 144.3
Sample B Male 137.5
Sample C Female 108.4
Sample D Female 110.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
77464886 Antisense, RP_070129_02_D03, Mouse strain C57BL/6J (56 days, male) 12.6
783 Antisense, RP_Baylor_102949, Mouse strain C57BL/6J (56 days, male) 3.2
782 Antisense, RP_Baylor_102949, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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