HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.0 nTPM
HPA:16.0 nTPM
GTEx:30.6 nTPM
FANTOM5:51.3 Scaled Tags Per Million
Pig:24.8 nTPM
Mouse:109.8 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034708Antibody HPA040425
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.0
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
2529 Female, age 94, left hemisphere 15.3
1911 Female, age 85, right hemisphere 11.7
2148 Female, age 91, left hemisphere 10.9
2621 Female, age 67, right hemisphere 10.7
1855 Male, age 76, left hemisphere 10.5
1898 Male, age 80, left hemisphere 9.6
Dentate gyrus
nTPM: 12.2
2530 Female, age 94, left hemisphere 15.5
2246 Female, age 85, both hemispheres 13.5
2010 Male, age 76, both hemispheres 12.6
2528 Male, age 74, both hemispheres 11.8
1927 Female, age 91, both hemispheres 10.3
2531 Female, age 67, both hemispheres 9.3
Entorhinal gyrus
nTPM: 13.8
2764 Male, age 80, right hemisphere 17.8
2613 Female, age 94, left hemisphere 15.8
2686 Male, age 75, right hemisphere 15.1
2117 Female, age 91, right hemisphere 14.5
1938 Female, age 85, left hemisphere 10.2
1787 Male, age 76, left hemisphere 9.5
Hippocampus, CA1
nTPM: 10.6
2082 Female, age 91, right hemisphere 12.4
2749 Male, age 80, left hemisphere 11.9
1873 Female, age 85, both hemispheres 11.0
2527 Male, age 74, both hemispheres 10.8
2045 Male, age 76, both hemispheres 6.9
Hippocampus, CA2
nTPM: 12.3
2437 Female, age 94, left hemisphere 14.6
1940 Female, age 85, left hemisphere 13.4
2113 Female, age 91, right hemisphere 13.0
1963 Male, age 80, left hemisphere 12.4
2249 Male, age 74, both hemispheres 11.4
1892 Male, age 76, both hemispheres 8.9
Hippocampus, CA3
nTPM: 10.6
1891 Female, age 85, both hemispheres 16.9
1867 Male, age 76, both hemispheres 12.3
2137 Male, age 80, left hemisphere 11.6
2620 Female, age 94, left hemisphere 9.8
2436 Male, age 74, both hemispheres 9.4
2861 Female, age 67, both hemispheres 3.8
Parahippocampal cortex
nTPM: 11.5
2692 Male, age 74, both hemispheres 19.8
2532 Female, age 72, left hemisphere 13.9
1990 Female, age 91, right hemisphere 13.8
1850 Male, age 80, both hemispheres 12.3
2693 Female, age 94, both hemispheres 12.3
1933 Female, age 85, both hemispheres 10.1
2018 Male, age 76, both hemispheres 9.6
2245 Female, age 91, both hemispheres 9.4
2250 Female, age 67, right hemisphere 8.1
2622 Female, age 67, right hemisphere 5.9
Perirhinal gyrus
nTPM: 9.8
2521 Female, age 94, right hemisphere 11.9
2848 Male, age 76, right hemisphere 10.5
1794 Male, age 80, right hemisphere 10.3
1847 Female, age 91, left hemisphere 8.1
1841 Female, age 85, right hemisphere 8.0
Subiculum
nTPM: 16.0
2042 Male, age 76, both hemispheres 20.4
1901 Male, age 80, both hemispheres 19.1
2438 Female, age 94, left hemisphere 18.3
2619 Male, age 74, both hemispheres 13.5
1977 Female, age 85, both hemispheres 12.6
2729 Female, age 91, right hemisphere 11.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.6
Samples: 197

Max nTPM: 47.1
Min nTPM: 15.6
Std nTPM: 5.7
Median nTPM: 29.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 43.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 42.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 41.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 41.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 40.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 40.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.3
FF:10169-103B7 60 years, female 62.7
FF:10153-102I9 76 years, female 39.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 31.9
Min nTPM: 18.2
Sample A Female 31.9
Sample B Female 25.6
Sample C Male 23.4
Sample D Male 18.2
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 24.3
Min nTPM: 20.4
Sample A Female 24.0
Sample B Female 24.3
Sample C Male 22.9
Sample D Male 20.4
Subiculum
nTPM: 22.2
Samples: 4

Max nTPM: 27.8
Min nTPM: 20.0
Sample A Female 27.8
Sample B Female 20.0
Sample C Male 20.6
Sample D Male 20.2
Ventral hippocampus
nTPM: 23.7
Samples: 4

Max nTPM: 30.3
Min nTPM: 16.1
Sample A Female 25.1
Sample B Female 16.1
Sample C Male 23.2
Sample D Male 30.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.8
Samples: 4

Max nTPM: 132.5
Min nTPM: 91.2
Sample A Male 101.0
Sample B Male 114.5
Sample C Female 91.2
Sample D Female 132.5
Hippocampal formation
nTPM: 87.9
Samples: 4

Max nTPM: 95.9
Min nTPM: 81.4
Sample A Male 85.1
Sample B Male 89.3
Sample C Female 95.9
Sample D Female 81.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
69873785 Antisense, RP_050512_02_A01, Mouse strain C57BL/6J (56 days, male) 11.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.