HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:3.8 nTPM
HPA:3.8 nTPM
GTEx:3.2 nTPM
FANTOM5:20.3 Scaled Tags Per Million
Pig:19.3 nTPM
Mouse:8.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 3.8
Sample id Sample description nTPM
Hippocampus
nTPM: 3.3
2529 Female, age 94, left hemisphere 4.4
1898 Male, age 80, left hemisphere 3.8
2148 Female, age 91, left hemisphere 3.4
1911 Female, age 85, right hemisphere 3.1
1855 Male, age 76, left hemisphere 2.9
2621 Female, age 67, right hemisphere 2.1
Dentate gyrus
nTPM: 3.3
1927 Female, age 91, both hemispheres 4.6
2010 Male, age 76, both hemispheres 4.1
2528 Male, age 74, both hemispheres 3.2
2531 Female, age 67, both hemispheres 3.2
2246 Female, age 85, both hemispheres 3.0
2530 Female, age 94, left hemisphere 2.0
Entorhinal gyrus
nTPM: 2.5
1938 Female, age 85, left hemisphere 3.7
1787 Male, age 76, left hemisphere 3.1
2764 Male, age 80, right hemisphere 2.5
2117 Female, age 91, right hemisphere 2.4
2686 Male, age 75, right hemisphere 1.8
2613 Female, age 94, left hemisphere 1.4
Hippocampus, CA1
nTPM: 3.8
2045 Male, age 76, both hemispheres 5.2
1873 Female, age 85, both hemispheres 3.7
2082 Female, age 91, right hemisphere 3.7
2749 Male, age 80, left hemisphere 3.5
2527 Male, age 74, both hemispheres 3.2
Hippocampus, CA2
nTPM: 3.4
2249 Male, age 74, both hemispheres 4.9
1892 Male, age 76, both hemispheres 3.6
2113 Female, age 91, right hemisphere 3.3
1963 Male, age 80, left hemisphere 3.2
1940 Female, age 85, left hemisphere 3.1
2437 Female, age 94, left hemisphere 2.3
Hippocampus, CA3
nTPM: 3.3
2137 Male, age 80, left hemisphere 4.4
1867 Male, age 76, both hemispheres 3.6
2620 Female, age 94, left hemisphere 3.5
2436 Male, age 74, both hemispheres 3.3
1891 Female, age 85, both hemispheres 3.1
2861 Female, age 67, both hemispheres 1.9
Parahippocampal cortex
nTPM: 3.0
1850 Male, age 80, both hemispheres 4.0
2018 Male, age 76, both hemispheres 3.8
2693 Female, age 94, both hemispheres 3.8
1990 Female, age 91, right hemisphere 3.4
2250 Female, age 67, right hemisphere 3.2
1933 Female, age 85, both hemispheres 2.6
2532 Female, age 72, left hemisphere 2.5
2245 Female, age 91, both hemispheres 2.4
2622 Female, age 67, right hemisphere 2.2
2692 Male, age 74, both hemispheres 2.0
Perirhinal gyrus
nTPM: 3.5
1841 Female, age 85, right hemisphere 4.2
1794 Male, age 80, right hemisphere 3.5
2521 Female, age 94, right hemisphere 3.5
2848 Male, age 76, right hemisphere 3.5
1847 Female, age 91, left hemisphere 2.8
Subiculum
nTPM: 2.5
2729 Female, age 91, right hemisphere 3.9
1901 Male, age 80, both hemispheres 3.8
1977 Female, age 85, both hemispheres 2.8
2042 Male, age 76, both hemispheres 1.5
2438 Female, age 94, left hemisphere 1.4
2619 Male, age 74, both hemispheres 1.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.2
Samples: 197

Max nTPM: 10.8
Min nTPM: 0.9
Std nTPM: 1.1
Median nTPM: 3.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 10.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 7.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 7.2
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 7.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 6.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 6.2
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 5.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 5.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 4.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 4.8
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 4.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.3
FF:10169-103B7 60 years, female 21.9
FF:10153-102I9 76 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.6
Sample A Female 21.7
Sample B Female 21.0
Sample C Male 18.9
Sample D Male 15.6
Entorhinal cortex
nTPM: 16.4
Samples: 4

Max nTPM: 19.2
Min nTPM: 13.5
Sample A Female 17.3
Sample B Female 19.2
Sample C Male 15.7
Sample D Male 13.5
Subiculum
nTPM: 17.0
Samples: 4

Max nTPM: 20.8
Min nTPM: 14.9
Sample A Female 20.8
Sample B Female 16.6
Sample C Male 15.5
Sample D Male 14.9
Ventral hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.0
Sample A Female 17.1
Sample B Female 16.2
Sample C Male 14.0
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 9.6
Min nTPM: 4.8
Sample A Male 9.1
Sample B Male 9.6
Sample C Female 5.9
Sample D Female 4.8
Hippocampal formation
nTPM: 8.3
Samples: 4

Max nTPM: 10.2
Min nTPM: 6.5
Sample A Male 9.5
Sample B Male 10.2
Sample C Female 6.5
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69816960 Antisense, RP_050510_02_C09, Mouse strain C57BL/6J (56 days, male) 0.5

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