HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:47.3 nTPM
HPA:47.3 nTPM
GTEx:43.7 nTPM
FANTOM5:79.3 Scaled Tags Per Million
Pig:53.8 nTPM
Mouse:87.5 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015827
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.3
Sample id Sample description nTPM
Hippocampus
nTPM: 44.1
1898 Male, age 80, left hemisphere 52.8
1855 Male, age 76, left hemisphere 46.7
2529 Female, age 94, left hemisphere 45.8
1911 Female, age 85, right hemisphere 41.4
2148 Female, age 91, left hemisphere 39.4
2621 Female, age 67, right hemisphere 38.5
Dentate gyrus
nTPM: 47.3
2530 Female, age 94, left hemisphere 70.7
2010 Male, age 76, both hemispheres 59.5
2531 Female, age 67, both hemispheres 42.6
1927 Female, age 91, both hemispheres 39.5
2246 Female, age 85, both hemispheres 38.6
2528 Male, age 74, both hemispheres 32.6
Entorhinal gyrus
nTPM: 38.8
2686 Male, age 75, right hemisphere 46.0
1787 Male, age 76, left hemisphere 40.1
1938 Female, age 85, left hemisphere 38.3
2764 Male, age 80, right hemisphere 38.0
2117 Female, age 91, right hemisphere 37.1
2613 Female, age 94, left hemisphere 33.0
Hippocampus, CA1
nTPM: 43.4
2749 Male, age 80, left hemisphere 54.6
2045 Male, age 76, both hemispheres 47.4
1873 Female, age 85, both hemispheres 43.8
2082 Female, age 91, right hemisphere 40.3
2527 Male, age 74, both hemispheres 30.8
Hippocampus, CA2
nTPM: 43.3
1963 Male, age 80, left hemisphere 55.4
1892 Male, age 76, both hemispheres 50.1
2437 Female, age 94, left hemisphere 45.7
1940 Female, age 85, left hemisphere 38.3
2113 Female, age 91, right hemisphere 35.4
2249 Male, age 74, both hemispheres 35.1
Hippocampus, CA3
nTPM: 41.0
1867 Male, age 76, both hemispheres 48.6
2137 Male, age 80, left hemisphere 46.6
1891 Female, age 85, both hemispheres 40.0
2861 Female, age 67, both hemispheres 39.8
2620 Female, age 94, left hemisphere 38.5
2436 Male, age 74, both hemispheres 32.6
Parahippocampal cortex
nTPM: 37.8
2018 Male, age 76, both hemispheres 50.8
1850 Male, age 80, both hemispheres 41.6
2532 Female, age 72, left hemisphere 41.3
1933 Female, age 85, both hemispheres 38.8
1990 Female, age 91, right hemisphere 37.3
2692 Male, age 74, both hemispheres 35.9
2245 Female, age 91, both hemispheres 35.7
2622 Female, age 67, right hemisphere 34.4
2693 Female, age 94, both hemispheres 32.0
2250 Female, age 67, right hemisphere 29.7
Perirhinal gyrus
nTPM: 36.6
1794 Male, age 80, right hemisphere 38.9
2848 Male, age 76, right hemisphere 38.6
1847 Female, age 91, left hemisphere 38.1
1841 Female, age 85, right hemisphere 37.4
2521 Female, age 94, right hemisphere 30.0
Subiculum
nTPM: 40.2
2042 Male, age 76, both hemispheres 48.6
1901 Male, age 80, both hemispheres 42.3
2729 Female, age 91, right hemisphere 40.7
1977 Female, age 85, both hemispheres 40.4
2438 Female, age 94, left hemisphere 39.1
2619 Male, age 74, both hemispheres 29.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.7
Samples: 197

Max nTPM: 184.1
Min nTPM: 11.3
Std nTPM: 25.5
Median nTPM: 36.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 184.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 173.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 127.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 119.5
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 113.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 111.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 108.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 105.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 98.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 96.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 95.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.3
FF:10153-102I9 76 years, female 83.4
FF:10169-103B7 60 years, female 75.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.8
Samples: 4

Max nTPM: 78.3
Min nTPM: 25.5
Sample A Female 78.3
Sample B Female 45.7
Sample C Male 65.7
Sample D Male 25.5
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 32.6
Min nTPM: 24.4
Sample A Female 24.4
Sample B Female 32.6
Sample C Male 26.1
Sample D Male 28.9
Subiculum
nTPM: 29.0
Samples: 4

Max nTPM: 34.2
Min nTPM: 22.9
Sample A Female 34.2
Sample B Female 31.3
Sample C Male 22.9
Sample D Male 27.7
Ventral hippocampus
nTPM: 34.8
Samples: 4

Max nTPM: 46.5
Min nTPM: 23.8
Sample A Female 39.4
Sample B Female 23.8
Sample C Male 29.3
Sample D Male 46.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.0
Samples: 4

Max nTPM: 85.2
Min nTPM: 76.3
Sample A Male 85.2
Sample B Male 76.3
Sample C Female 79.2
Sample D Female 83.2
Hippocampal formation
nTPM: 87.5
Samples: 4

Max nTPM: 99.3
Min nTPM: 80.3
Sample A Male 88.6
Sample B Male 81.7
Sample C Female 99.3
Sample D Female 80.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
75990672 Antisense, RP_060608_01_E11, Mouse strain C57BL/6J (56 days, male) 4.3

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