HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:39.2 nTPM
HPA:39.2 nTPM
GTEx:36.1 nTPM
FANTOM5:300.8 Scaled Tags Per Million
Pig:58.9 nTPM
Mouse:46.3 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 37.6
2529 Female, age 94, left hemisphere 45.7
2621 Female, age 67, right hemisphere 40.7
1911 Female, age 85, right hemisphere 38.8
1855 Male, age 76, left hemisphere 38.6
2148 Female, age 91, left hemisphere 32.2
1898 Male, age 80, left hemisphere 29.8
Dentate gyrus
nTPM: 33.7
2530 Female, age 94, left hemisphere 48.4
2531 Female, age 67, both hemispheres 38.9
2010 Male, age 76, both hemispheres 35.4
2528 Male, age 74, both hemispheres 28.7
2246 Female, age 85, both hemispheres 27.5
1927 Female, age 91, both hemispheres 23.4
Entorhinal gyrus
nTPM: 28.0
2686 Male, age 75, right hemisphere 38.6
2117 Female, age 91, right hemisphere 30.0
1787 Male, age 76, left hemisphere 29.9
2613 Female, age 94, left hemisphere 24.6
1938 Female, age 85, left hemisphere 24.4
2764 Male, age 80, right hemisphere 20.5
Hippocampus, CA1
nTPM: 28.6
2527 Male, age 74, both hemispheres 40.0
2045 Male, age 76, both hemispheres 29.8
1873 Female, age 85, both hemispheres 25.0
2749 Male, age 80, left hemisphere 24.8
2082 Female, age 91, right hemisphere 23.5
Hippocampus, CA2
nTPM: 32.7
2437 Female, age 94, left hemisphere 44.5
1963 Male, age 80, left hemisphere 36.5
2249 Male, age 74, both hemispheres 33.1
2113 Female, age 91, right hemisphere 31.2
1892 Male, age 76, both hemispheres 25.8
1940 Female, age 85, left hemisphere 25.2
Hippocampus, CA3
nTPM: 39.2
2861 Female, age 67, both hemispheres 65.4
2436 Male, age 74, both hemispheres 45.3
1867 Male, age 76, both hemispheres 38.0
1891 Female, age 85, both hemispheres 31.8
2137 Male, age 80, left hemisphere 30.0
2620 Female, age 94, left hemisphere 24.8
Parahippocampal cortex
nTPM: 30.8
2622 Female, age 67, right hemisphere 45.1
2018 Male, age 76, both hemispheres 44.0
2692 Male, age 74, both hemispheres 35.0
2532 Female, age 72, left hemisphere 32.3
2245 Female, age 91, both hemispheres 30.2
2693 Female, age 94, both hemispheres 26.0
2250 Female, age 67, right hemisphere 24.8
1933 Female, age 85, both hemispheres 23.9
1990 Female, age 91, right hemisphere 23.5
1850 Male, age 80, both hemispheres 22.9
Perirhinal gyrus
nTPM: 23.1
1841 Female, age 85, right hemisphere 28.8
1794 Male, age 80, right hemisphere 23.5
2521 Female, age 94, right hemisphere 23.5
1847 Female, age 91, left hemisphere 19.9
2848 Male, age 76, right hemisphere 19.6
Subiculum
nTPM: 31.9
2438 Female, age 94, left hemisphere 42.5
2042 Male, age 76, both hemispheres 38.4
2619 Male, age 74, both hemispheres 36.5
2729 Female, age 91, right hemisphere 25.7
1977 Female, age 85, both hemispheres 24.4
1901 Male, age 80, both hemispheres 23.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.1
Samples: 197

Max nTPM: 134.6
Min nTPM: 8.9
Std nTPM: 19.0
Median nTPM: 32.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 134.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 116.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 106.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 88.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 87.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 76.4
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 75.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 73.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 70.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 70.0
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 69.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 300.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 300.8
FF:10169-103B7 60 years, female 331.6
FF:10153-102I9 76 years, female 270.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.4
Samples: 4

Max nTPM: 54.3
Min nTPM: 39.7
Sample A Female 51.1
Sample B Female 40.5
Sample C Male 54.3
Sample D Male 39.7
Entorhinal cortex
nTPM: 54.2
Samples: 4

Max nTPM: 62.3
Min nTPM: 47.7
Sample A Female 52.7
Sample B Female 54.2
Sample C Male 62.3
Sample D Male 47.7
Subiculum
nTPM: 48.7
Samples: 4

Max nTPM: 57.0
Min nTPM: 36.1
Sample A Female 57.0
Sample B Female 36.1
Sample C Male 52.6
Sample D Male 48.9
Ventral hippocampus
nTPM: 58.9
Samples: 4

Max nTPM: 91.4
Min nTPM: 43.5
Sample A Female 47.2
Sample B Female 43.5
Sample C Male 91.4
Sample D Male 53.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.3
Samples: 4

Max nTPM: 52.0
Min nTPM: 41.7
Sample A Male 52.0
Sample B Male 41.7
Sample C Female 47.7
Sample D Female 43.6
Hippocampal formation
nTPM: 45.7
Samples: 4

Max nTPM: 46.6
Min nTPM: 43.3
Sample A Male 46.5
Sample B Male 46.6
Sample C Female 43.3
Sample D Female 46.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69015278 Antisense, RP_050310_02_F06, Mouse strain C57BL/6J (56 days, male) 3.9

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