HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:41.5 nTPM
HPA:41.5 nTPM
GTEx:40.1 nTPM
FANTOM5:44.7 Scaled Tags Per Million
Pig:6.5 nTPM
Mouse:16.9 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.0
1898 Male, age 80, left hemisphere 43.2
1855 Male, age 76, left hemisphere 42.0
2148 Female, age 91, left hemisphere 38.0
2621 Female, age 67, right hemisphere 36.9
1911 Female, age 85, right hemisphere 34.5
2529 Female, age 94, left hemisphere 33.6
Dentate gyrus
nTPM: 37.8
2530 Female, age 94, left hemisphere 42.6
1927 Female, age 91, both hemispheres 41.0
2010 Male, age 76, both hemispheres 39.6
2528 Male, age 74, both hemispheres 35.7
2246 Female, age 85, both hemispheres 34.4
2531 Female, age 67, both hemispheres 33.2
Entorhinal gyrus
nTPM: 36.6
2613 Female, age 94, left hemisphere 42.0
2764 Male, age 80, right hemisphere 37.2
2686 Male, age 75, right hemisphere 35.6
1787 Male, age 76, left hemisphere 35.4
2117 Female, age 91, right hemisphere 35.1
1938 Female, age 85, left hemisphere 34.5
Hippocampus, CA1
nTPM: 41.5
2749 Male, age 80, left hemisphere 62.5
1873 Female, age 85, both hemispheres 38.2
2045 Male, age 76, both hemispheres 36.1
2527 Male, age 74, both hemispheres 35.8
2082 Female, age 91, right hemisphere 34.9
Hippocampus, CA2
nTPM: 39.1
1963 Male, age 80, left hemisphere 46.7
1892 Male, age 76, both hemispheres 44.7
2249 Male, age 74, both hemispheres 38.2
2437 Female, age 94, left hemisphere 36.9
2113 Female, age 91, right hemisphere 35.7
1940 Female, age 85, left hemisphere 32.1
Hippocampus, CA3
nTPM: 38.9
2137 Male, age 80, left hemisphere 52.4
1867 Male, age 76, both hemispheres 39.0
2436 Male, age 74, both hemispheres 38.0
2861 Female, age 67, both hemispheres 36.5
2620 Female, age 94, left hemisphere 34.7
1891 Female, age 85, both hemispheres 32.9
Parahippocampal cortex
nTPM: 33.6
1850 Male, age 80, both hemispheres 35.5
1990 Female, age 91, right hemisphere 34.6
2245 Female, age 91, both hemispheres 34.5
2018 Male, age 76, both hemispheres 34.0
1933 Female, age 85, both hemispheres 33.8
2692 Male, age 74, both hemispheres 33.8
2532 Female, age 72, left hemisphere 32.8
2250 Female, age 67, right hemisphere 32.6
2693 Female, age 94, both hemispheres 32.2
2622 Female, age 67, right hemisphere 32.1
Perirhinal gyrus
nTPM: 34.1
1847 Female, age 91, left hemisphere 37.2
1794 Male, age 80, right hemisphere 35.0
1841 Female, age 85, right hemisphere 33.1
2521 Female, age 94, right hemisphere 33.1
2848 Male, age 76, right hemisphere 32.2
Subiculum
nTPM: 35.8
1901 Male, age 80, both hemispheres 42.1
2042 Male, age 76, both hemispheres 39.0
2729 Female, age 91, right hemisphere 34.7
1977 Female, age 85, both hemispheres 33.6
2438 Female, age 94, left hemisphere 33.4
2619 Male, age 74, both hemispheres 32.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.1
Samples: 197

Max nTPM: 98.7
Min nTPM: 15.7
Std nTPM: 15.4
Median nTPM: 36.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 98.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 85.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 82.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 80.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 77.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 76.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 75.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 71.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 70.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 70.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 70.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.7
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 28.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 9.1
Min nTPM: 2.5
Sample A Female 8.4
Sample B Female 5.9
Sample C Male 9.1
Sample D Male 2.5
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 8.4
Min nTPM: 4.1
Sample A Female 8.4
Sample B Female 7.6
Sample C Male 4.9
Sample D Male 4.1
Subiculum
nTPM: 5.6
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.5
Sample A Female 6.4
Sample B Female 5.0
Sample C Male 4.5
Sample D Male 6.4
Ventral hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 7.9
Min nTPM: 3.4
Sample A Female 6.0
Sample B Female 3.4
Sample C Male 7.9
Sample D Male 5.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 16.5
Min nTPM: 14.6
Sample A Male 16.5
Sample B Male 14.6
Sample C Female 15.8
Sample D Female 14.8
Hippocampal formation
nTPM: 16.9
Samples: 4

Max nTPM: 18.5
Min nTPM: 14.9
Sample A Male 14.9
Sample B Male 15.7
Sample C Female 18.5
Sample D Female 18.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69817793 Antisense, RP_050510_03_G08, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

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