HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.1 nTPM
HPA:57.1 nTPM
GTEx:76.2 nTPM
FANTOM5:34.5 Scaled Tags Per Million
Pig:10.1 nTPM
Mouse:62.2 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015746
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.1
Sample id Sample description nTPM
Hippocampus
nTPM: 53.6
1898 Male, age 80, left hemisphere 56.1
2529 Female, age 94, left hemisphere 54.5
2148 Female, age 91, left hemisphere 54.1
2621 Female, age 67, right hemisphere 52.7
1911 Female, age 85, right hemisphere 52.2
1855 Male, age 76, left hemisphere 52.1
Dentate gyrus
nTPM: 53.0
2531 Female, age 67, both hemispheres 55.8
2530 Female, age 94, left hemisphere 55.1
1927 Female, age 91, both hemispheres 53.6
2246 Female, age 85, both hemispheres 53.0
2528 Male, age 74, both hemispheres 51.3
2010 Male, age 76, both hemispheres 49.1
Entorhinal gyrus
nTPM: 53.1
2613 Female, age 94, left hemisphere 55.9
2764 Male, age 80, right hemisphere 55.2
1787 Male, age 76, left hemisphere 54.0
1938 Female, age 85, left hemisphere 53.4
2117 Female, age 91, right hemisphere 52.0
2686 Male, age 75, right hemisphere 48.3
Hippocampus, CA1
nTPM: 53.2
2749 Male, age 80, left hemisphere 61.5
2527 Male, age 74, both hemispheres 54.3
1873 Female, age 85, both hemispheres 51.4
2045 Male, age 76, both hemispheres 50.6
2082 Female, age 91, right hemisphere 48.0
Hippocampus, CA2
nTPM: 53.6
2437 Female, age 94, left hemisphere 65.2
1892 Male, age 76, both hemispheres 64.2
1963 Male, age 80, left hemisphere 49.4
2249 Male, age 74, both hemispheres 48.3
2113 Female, age 91, right hemisphere 47.6
1940 Female, age 85, left hemisphere 46.7
Hippocampus, CA3
nTPM: 57.1
2137 Male, age 80, left hemisphere 61.7
2861 Female, age 67, both hemispheres 61.7
2620 Female, age 94, left hemisphere 60.2
1867 Male, age 76, both hemispheres 58.3
1891 Female, age 85, both hemispheres 51.2
2436 Male, age 74, both hemispheres 49.7
Parahippocampal cortex
nTPM: 50.4
2245 Female, age 91, both hemispheres 55.0
2250 Female, age 67, right hemisphere 50.7
1990 Female, age 91, right hemisphere 50.6
1933 Female, age 85, both hemispheres 50.5
2693 Female, age 94, both hemispheres 50.4
2692 Male, age 74, both hemispheres 50.3
1850 Male, age 80, both hemispheres 50.2
2622 Female, age 67, right hemisphere 49.0
2018 Male, age 76, both hemispheres 48.9
2532 Female, age 72, left hemisphere 48.2
Perirhinal gyrus
nTPM: 52.4
1794 Male, age 80, right hemisphere 53.9
1847 Female, age 91, left hemisphere 53.6
2521 Female, age 94, right hemisphere 52.2
2848 Male, age 76, right hemisphere 52.1
1841 Female, age 85, right hemisphere 50.3
Subiculum
nTPM: 55.2
2438 Female, age 94, left hemisphere 68.1
1901 Male, age 80, both hemispheres 58.5
1977 Female, age 85, both hemispheres 54.4
2619 Male, age 74, both hemispheres 53.4
2042 Male, age 76, both hemispheres 50.1
2729 Female, age 91, right hemisphere 46.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.2
Samples: 197

Max nTPM: 203.7
Min nTPM: 23.5
Std nTPM: 24.4
Median nTPM: 73.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 203.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 175.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 153.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 138.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 128.6
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 123.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 118.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 118.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 118.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 117.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 115.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.5
FF:10153-102I9 76 years, female 43.9
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.0
Sample A Female 11.9
Sample B Female 10.4
Sample C Male 9.1
Sample D Male 9.0
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 10.4
Min nTPM: 9.7
Sample A Female 10.4
Sample B Female 9.7
Sample C Male 10.0
Sample D Male 9.8
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.9
Sample A Female 9.3
Sample B Female 7.9
Sample C Male 8.6
Sample D Male 8.1
Ventral hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 11.7
Min nTPM: 8.5
Sample A Female 8.7
Sample B Female 8.5
Sample C Male 11.2
Sample D Male 11.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.1
Samples: 4

Max nTPM: 59.7
Min nTPM: 56.4
Sample A Male 59.7
Sample B Male 57.0
Sample C Female 56.4
Sample D Female 59.3
Hippocampal formation
nTPM: 62.2
Samples: 4

Max nTPM: 67.4
Min nTPM: 55.8
Sample A Male 67.4
Sample B Male 55.8
Sample C Female 63.0
Sample D Female 62.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
70565276 Antisense, RP_050623_04_F04, Mouse strain C57BL/6J (56 days, male) 6.4
75041563 Antisense, RP_060412_04_F07, Mouse strain C57BL/6J (56 days, male) 3.9
70919878 Antisense, RP_050713_02_C02, Mouse strain C57BL/6J (56 days, male) 2.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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