HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.1 nTPM
HPA:42.1 nTPM
GTEx:48.1 nTPM
FANTOM5:330.9 Scaled Tags Per Million
Pig:152.4 nTPM
Mouse:202.5 nTPM
Allen mouse:17.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031182Antibody HPA054917
Glial cells LowNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.1
Sample id Sample description nTPM
Hippocampus
nTPM: 26.6
1898 Male, age 80, left hemisphere 60.7
1855 Male, age 76, left hemisphere 40.7
2621 Female, age 67, right hemisphere 30.0
2148 Female, age 91, left hemisphere 17.3
1911 Female, age 85, right hemisphere 10.9
2529 Female, age 94, left hemisphere 0.1
Dentate gyrus
nTPM: 35.9
2010 Male, age 76, both hemispheres 52.0
2530 Female, age 94, left hemisphere 50.6
1927 Female, age 91, both hemispheres 50.2
2246 Female, age 85, both hemispheres 30.6
2531 Female, age 67, both hemispheres 18.8
2528 Male, age 74, both hemispheres 13.5
Entorhinal gyrus
nTPM: 25.0
2764 Male, age 80, right hemisphere 41.5
1938 Female, age 85, left hemisphere 32.9
2613 Female, age 94, left hemisphere 28.6
1787 Male, age 76, left hemisphere 24.2
2117 Female, age 91, right hemisphere 15.7
2686 Male, age 75, right hemisphere 7.4
Hippocampus, CA1
nTPM: 36.7
2749 Male, age 80, left hemisphere 74.0
1873 Female, age 85, both hemispheres 56.7
2045 Male, age 76, both hemispheres 37.6
2527 Male, age 74, both hemispheres 15.3
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 31.8
1963 Male, age 80, left hemisphere 72.3
1892 Male, age 76, both hemispheres 71.2
2437 Female, age 94, left hemisphere 20.5
1940 Female, age 85, left hemisphere 14.7
2249 Male, age 74, both hemispheres 10.3
2113 Female, age 91, right hemisphere 1.8
Hippocampus, CA3
nTPM: 19.9
1867 Male, age 76, both hemispheres 32.7
1891 Female, age 85, both hemispheres 29.0
2137 Male, age 80, left hemisphere 27.7
2620 Female, age 94, left hemisphere 25.8
2861 Female, age 67, both hemispheres 4.3
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 21.8
1850 Male, age 80, both hemispheres 54.1
2532 Female, age 72, left hemisphere 34.8
1933 Female, age 85, both hemispheres 29.4
1990 Female, age 91, right hemisphere 29.2
2245 Female, age 91, both hemispheres 21.8
2693 Female, age 94, both hemispheres 17.9
2692 Male, age 74, both hemispheres 12.7
2018 Male, age 76, both hemispheres 12.0
2250 Female, age 67, right hemisphere 6.1
2622 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 42.1
1847 Female, age 91, left hemisphere 55.3
1794 Male, age 80, right hemisphere 49.8
1841 Female, age 85, right hemisphere 38.6
2521 Female, age 94, right hemisphere 35.1
2848 Male, age 76, right hemisphere 31.9
Subiculum
nTPM: 22.0
1977 Female, age 85, both hemispheres 42.5
1901 Male, age 80, both hemispheres 35.8
2438 Female, age 94, left hemisphere 33.0
2042 Male, age 76, both hemispheres 13.4
2619 Male, age 74, both hemispheres 7.2
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.1
Samples: 197

Max nTPM: 133.0
Min nTPM: 10.6
Std nTPM: 21.2
Median nTPM: 42.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 133.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 118.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 112.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 105.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 104.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 99.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 95.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 91.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 88.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 87.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 86.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 330.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 330.9
FF:10169-103B7 60 years, female 466.6
FF:10153-102I9 76 years, female 195.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 152.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 142.9
Samples: 4

Max nTPM: 187.4
Min nTPM: 100.6
Sample A Female 187.4
Sample B Female 151.2
Sample C Male 132.4
Sample D Male 100.6
Entorhinal cortex
nTPM: 152.4
Samples: 4

Max nTPM: 161.3
Min nTPM: 141.2
Sample A Female 159.1
Sample B Female 161.3
Sample C Male 148.1
Sample D Male 141.2
Subiculum
nTPM: 137.2
Samples: 4

Max nTPM: 186.3
Min nTPM: 113.9
Sample A Female 186.3
Sample B Female 124.9
Sample C Male 123.5
Sample D Male 113.9
Ventral hippocampus
nTPM: 130.8
Samples: 4

Max nTPM: 145.9
Min nTPM: 94.4
Sample A Female 142.8
Sample B Female 94.4
Sample C Male 145.9
Sample D Male 139.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 202.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 202.5
Samples: 4

Max nTPM: 235.4
Min nTPM: 180.2
Sample A Male 180.2
Sample B Male 201.5
Sample C Female 192.7
Sample D Female 235.4
Hippocampal formation
nTPM: 181.5
Samples: 4

Max nTPM: 190.4
Min nTPM: 167.4
Sample A Male 190.4
Sample B Male 181.4
Sample C Female 186.7
Sample D Female 167.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.1
71358627 Antisense, RP_050725_03_F05, Mouse strain C57BL/6J (56 days, male) 18.9
68844642 Antisense, RP_050222_02_B03, Mouse strain C57BL/6J (56 days, male) 15.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.