HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.6 nTPM
HPA:21.6 nTPM
GTEx:14.6 nTPM
FANTOM5:51.5 Scaled Tags Per Million
Pig:40.6 nTPM
Mouse:4.1 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027249Antibody HPA027274
Glial cells MediumLow
Neuronal cells LowLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.6
Sample id Sample description nTPM
Hippocampus
nTPM: 13.8
2529 Female, age 94, left hemisphere 16.9
2621 Female, age 67, right hemisphere 15.7
1911 Female, age 85, right hemisphere 14.5
1898 Male, age 80, left hemisphere 12.0
2148 Female, age 91, left hemisphere 12.0
1855 Male, age 76, left hemisphere 11.8
Dentate gyrus
nTPM: 11.1
2531 Female, age 67, both hemispheres 15.1
2528 Male, age 74, both hemispheres 12.1
1927 Female, age 91, both hemispheres 11.6
2246 Female, age 85, both hemispheres 11.0
2530 Female, age 94, left hemisphere 9.0
2010 Male, age 76, both hemispheres 7.8
Entorhinal gyrus
nTPM: 21.6
2613 Female, age 94, left hemisphere 40.8
2764 Male, age 80, right hemisphere 22.3
1787 Male, age 76, left hemisphere 19.9
1938 Female, age 85, left hemisphere 19.3
2686 Male, age 75, right hemisphere 17.8
2117 Female, age 91, right hemisphere 9.8
Hippocampus, CA1
nTPM: 15.3
2749 Male, age 80, left hemisphere 29.2
2527 Male, age 74, both hemispheres 19.1
1873 Female, age 85, both hemispheres 11.4
2045 Male, age 76, both hemispheres 8.9
2082 Female, age 91, right hemisphere 7.7
Hippocampus, CA2
nTPM: 14.1
1963 Male, age 80, left hemisphere 22.0
2437 Female, age 94, left hemisphere 15.7
1940 Female, age 85, left hemisphere 13.4
1892 Male, age 76, both hemispheres 11.8
2113 Female, age 91, right hemisphere 11.4
2249 Male, age 74, both hemispheres 10.5
Hippocampus, CA3
nTPM: 14.2
2137 Male, age 80, left hemisphere 27.9
2861 Female, age 67, both hemispheres 19.5
2620 Female, age 94, left hemisphere 14.5
2436 Male, age 74, both hemispheres 8.6
1867 Male, age 76, both hemispheres 7.3
1891 Female, age 85, both hemispheres 7.2
Parahippocampal cortex
nTPM: 18.5
2245 Female, age 91, both hemispheres 23.3
2250 Female, age 67, right hemisphere 21.7
2693 Female, age 94, both hemispheres 21.7
1933 Female, age 85, both hemispheres 20.9
2622 Female, age 67, right hemisphere 20.1
2692 Male, age 74, both hemispheres 17.1
1850 Male, age 80, both hemispheres 16.2
1990 Female, age 91, right hemisphere 16.0
2532 Female, age 72, left hemisphere 15.4
2018 Male, age 76, both hemispheres 12.2
Perirhinal gyrus
nTPM: 19.0
2521 Female, age 94, right hemisphere 31.1
1847 Female, age 91, left hemisphere 26.3
1794 Male, age 80, right hemisphere 14.2
2848 Male, age 76, right hemisphere 13.5
1841 Female, age 85, right hemisphere 9.8
Subiculum
nTPM: 11.4
2619 Male, age 74, both hemispheres 15.5
1977 Female, age 85, both hemispheres 14.8
1901 Male, age 80, both hemispheres 10.8
2729 Female, age 91, right hemisphere 9.7
2438 Female, age 94, left hemisphere 9.3
2042 Male, age 76, both hemispheres 8.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.6
Samples: 197

Max nTPM: 47.3
Min nTPM: 2.3
Std nTPM: 8.2
Median nTPM: 12.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 47.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 45.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 39.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 36.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 35.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 35.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 33.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 33.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 31.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 31.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.5
FF:10153-102I9 76 years, female 57.1
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.8
Samples: 4

Max nTPM: 41.4
Min nTPM: 26.8
Sample A Female 41.4
Sample B Female 36.4
Sample C Male 26.8
Sample D Male 34.5
Entorhinal cortex
nTPM: 40.6
Samples: 4

Max nTPM: 50.9
Min nTPM: 31.0
Sample A Female 44.6
Sample B Female 31.0
Sample C Male 50.9
Sample D Male 36.0
Subiculum
nTPM: 36.6
Samples: 4

Max nTPM: 48.7
Min nTPM: 30.5
Sample A Female 48.7
Sample B Female 30.5
Sample C Male 35.1
Sample D Male 32.2
Ventral hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 42.9
Min nTPM: 26.0
Sample A Female 28.4
Sample B Female 26.0
Sample C Male 42.9
Sample D Male 42.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 2.9
Sample A Male 6.5
Sample B Male 2.9
Sample C Female 3.6
Sample D Female 3.2
Hippocampal formation
nTPM: 3.0
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.2
Sample A Male 3.0
Sample B Male 3.6
Sample C Female 3.1
Sample D Female 2.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69735777 Antisense, RP_050503_03_E06, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.