HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:54.0 nTPM
HPA:54.0 nTPM
GTEx:44.6 nTPM
FANTOM5:138.5 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:46.9 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009438
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.0
Sample id Sample description nTPM
Hippocampus
nTPM: 52.3
2529 Female, age 94, left hemisphere 56.1
1911 Female, age 85, right hemisphere 54.1
1898 Male, age 80, left hemisphere 52.4
2148 Female, age 91, left hemisphere 51.7
2621 Female, age 67, right hemisphere 50.6
1855 Male, age 76, left hemisphere 49.3
Dentate gyrus
nTPM: 50.0
2528 Male, age 74, both hemispheres 60.6
2246 Female, age 85, both hemispheres 52.6
1927 Female, age 91, both hemispheres 50.0
2530 Female, age 94, left hemisphere 46.9
2010 Male, age 76, both hemispheres 45.8
2531 Female, age 67, both hemispheres 44.0
Entorhinal gyrus
nTPM: 52.6
2117 Female, age 91, right hemisphere 67.6
1938 Female, age 85, left hemisphere 57.1
2686 Male, age 75, right hemisphere 52.2
1787 Male, age 76, left hemisphere 49.2
2613 Female, age 94, left hemisphere 44.9
2764 Male, age 80, right hemisphere 44.6
Hippocampus, CA1
nTPM: 51.1
2527 Male, age 74, both hemispheres 59.4
1873 Female, age 85, both hemispheres 52.7
2082 Female, age 91, right hemisphere 48.9
2749 Male, age 80, left hemisphere 48.9
2045 Male, age 76, both hemispheres 45.5
Hippocampus, CA2
nTPM: 50.4
2249 Male, age 74, both hemispheres 55.8
1940 Female, age 85, left hemisphere 54.4
2113 Female, age 91, right hemisphere 52.1
2437 Female, age 94, left hemisphere 50.3
1963 Male, age 80, left hemisphere 45.7
1892 Male, age 76, both hemispheres 44.1
Hippocampus, CA3
nTPM: 51.0
2436 Male, age 74, both hemispheres 58.9
1891 Female, age 85, both hemispheres 54.5
2137 Male, age 80, left hemisphere 51.5
1867 Male, age 76, both hemispheres 47.6
2620 Female, age 94, left hemisphere 46.7
2861 Female, age 67, both hemispheres 46.6
Parahippocampal cortex
nTPM: 54.0
2250 Female, age 67, right hemisphere 69.0
2692 Male, age 74, both hemispheres 62.5
1933 Female, age 85, both hemispheres 58.6
2622 Female, age 67, right hemisphere 53.5
1990 Female, age 91, right hemisphere 52.1
2693 Female, age 94, both hemispheres 51.5
2245 Female, age 91, both hemispheres 50.4
1850 Male, age 80, both hemispheres 50.2
2532 Female, age 72, left hemisphere 46.6
2018 Male, age 76, both hemispheres 45.8
Perirhinal gyrus
nTPM: 50.2
1841 Female, age 85, right hemisphere 55.7
1794 Male, age 80, right hemisphere 51.1
2521 Female, age 94, right hemisphere 50.0
1847 Female, age 91, left hemisphere 49.6
2848 Male, age 76, right hemisphere 44.5
Subiculum
nTPM: 53.4
2619 Male, age 74, both hemispheres 62.2
2729 Female, age 91, right hemisphere 59.5
2438 Female, age 94, left hemisphere 51.5
1901 Male, age 80, both hemispheres 50.1
1977 Female, age 85, both hemispheres 49.7
2042 Male, age 76, both hemispheres 47.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.6
Samples: 197

Max nTPM: 297.4
Min nTPM: 6.1
Std nTPM: 37.7
Median nTPM: 35.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 297.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 205.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 179.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 171.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 167.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 159.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 155.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 131.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 128.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 123.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 123.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 138.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 138.5
FF:10169-103B7 60 years, female 182.0
FF:10153-102I9 76 years, female 95.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.6
Sample A Female 8.2
Sample B Female 7.6
Sample C Male 9.6
Sample D Male 9.8
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.2
Sample A Female 10.8
Sample B Female 11.5
Sample C Male 12.8
Sample D Male 9.2
Subiculum
nTPM: 9.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.5
Sample A Female 10.7
Sample B Female 9.6
Sample C Male 8.5
Sample D Male 9.7
Ventral hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 13.2
Min nTPM: 6.2
Sample A Female 6.2
Sample B Female 6.9
Sample C Male 13.2
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.0
Samples: 4

Max nTPM: 55.3
Min nTPM: 39.1
Sample A Male 48.4
Sample B Male 45.0
Sample C Female 55.3
Sample D Female 39.1
Hippocampal formation
nTPM: 41.0
Samples: 4

Max nTPM: 45.4
Min nTPM: 38.7
Sample A Male 41.1
Sample B Male 38.9
Sample C Female 38.7
Sample D Female 45.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
77280341 Antisense, RP_070116_01_B11, Mouse strain C57BL/6J (56 days, male) 2.1
68076972 Antisense, RP_040929_01_B03, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

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