HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.5 nTPM
HPA:28.5 nTPM
GTEx:23.4 nTPM
FANTOM5:27.2 Scaled Tags Per Million
Pig:43.0 nTPM
Mouse:55.2 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037909
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.5
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
2148 Female, age 91, left hemisphere 27.5
1898 Male, age 80, left hemisphere 27.2
2529 Female, age 94, left hemisphere 27.2
1855 Male, age 76, left hemisphere 26.4
2621 Female, age 67, right hemisphere 26.2
1911 Female, age 85, right hemisphere 25.8
Dentate gyrus
nTPM: 27.6
2010 Male, age 76, both hemispheres 28.7
2528 Male, age 74, both hemispheres 28.3
2246 Female, age 85, both hemispheres 27.6
2531 Female, age 67, both hemispheres 27.5
2530 Female, age 94, left hemisphere 26.9
1927 Female, age 91, both hemispheres 26.8
Entorhinal gyrus
nTPM: 27.6
2686 Male, age 75, right hemisphere 28.6
2764 Male, age 80, right hemisphere 28.1
1938 Female, age 85, left hemisphere 27.6
1787 Male, age 76, left hemisphere 27.1
2117 Female, age 91, right hemisphere 27.1
2613 Female, age 94, left hemisphere 27.0
Hippocampus, CA1
nTPM: 26.9
2082 Female, age 91, right hemisphere 28.5
1873 Female, age 85, both hemispheres 27.7
2527 Male, age 74, both hemispheres 26.6
2749 Male, age 80, left hemisphere 25.9
2045 Male, age 76, both hemispheres 25.8
Hippocampus, CA2
nTPM: 28.1
2249 Male, age 74, both hemispheres 30.9
1940 Female, age 85, left hemisphere 28.9
2113 Female, age 91, right hemisphere 27.8
2437 Female, age 94, left hemisphere 27.6
1963 Male, age 80, left hemisphere 26.8
1892 Male, age 76, both hemispheres 26.7
Hippocampus, CA3
nTPM: 27.4
2436 Male, age 74, both hemispheres 29.1
2620 Female, age 94, left hemisphere 28.4
1891 Female, age 85, both hemispheres 26.9
1867 Male, age 76, both hemispheres 26.7
2861 Female, age 67, both hemispheres 26.7
2137 Male, age 80, left hemisphere 26.3
Parahippocampal cortex
nTPM: 27.5
1850 Male, age 80, both hemispheres 30.2
1990 Female, age 91, right hemisphere 28.6
2018 Male, age 76, both hemispheres 27.7
1933 Female, age 85, both hemispheres 27.6
2692 Male, age 74, both hemispheres 27.4
2532 Female, age 72, left hemisphere 27.3
2250 Female, age 67, right hemisphere 26.9
2622 Female, age 67, right hemisphere 26.5
2245 Female, age 91, both hemispheres 26.4
2693 Female, age 94, both hemispheres 26.0
Perirhinal gyrus
nTPM: 28.5
1794 Male, age 80, right hemisphere 29.2
1841 Female, age 85, right hemisphere 29.2
2848 Male, age 76, right hemisphere 28.8
1847 Female, age 91, left hemisphere 27.9
2521 Female, age 94, right hemisphere 27.1
Subiculum
nTPM: 27.1
2438 Female, age 94, left hemisphere 27.8
2729 Female, age 91, right hemisphere 27.5
1977 Female, age 85, both hemispheres 27.4
2619 Male, age 74, both hemispheres 27.3
2042 Male, age 76, both hemispheres 26.5
1901 Male, age 80, both hemispheres 26.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 63.1
Min nTPM: 11.2
Std nTPM: 7.3
Median nTPM: 22.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 63.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 58.6
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 49.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 47.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 46.9
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 46.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 42.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 39.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 37.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 36.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.2
FF:10153-102I9 76 years, female 32.4
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.0
Samples: 4

Max nTPM: 53.2
Min nTPM: 33.1
Sample A Female 53.2
Sample B Female 38.1
Sample C Male 47.7
Sample D Male 33.1
Entorhinal cortex
nTPM: 31.0
Samples: 4

Max nTPM: 33.2
Min nTPM: 27.1
Sample A Female 33.2
Sample B Female 32.1
Sample C Male 31.5
Sample D Male 27.1
Subiculum
nTPM: 36.8
Samples: 4

Max nTPM: 42.4
Min nTPM: 30.5
Sample A Female 42.4
Sample B Female 35.7
Sample C Male 30.5
Sample D Male 38.6
Ventral hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 46.3
Min nTPM: 31.4
Sample A Female 41.9
Sample B Female 31.4
Sample C Male 46.3
Sample D Male 40.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.2
Samples: 4

Max nTPM: 55.8
Min nTPM: 54.1
Sample A Male 55.8
Sample B Male 54.1
Sample C Female 55.6
Sample D Female 55.1
Hippocampal formation
nTPM: 53.8
Samples: 4

Max nTPM: 55.7
Min nTPM: 51.2
Sample A Male 51.2
Sample B Male 53.4
Sample C Female 55.0
Sample D Female 55.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
74357609 Antisense, RP_060119_03_A11, Mouse strain C57BL/6J (56 days, male) 1.6

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