HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.4 nTPM
HPA:38.4 nTPM
GTEx:36.7 nTPM
FANTOM5:153.2 Scaled Tags Per Million
Pig:61.7 nTPM
Mouse:166.7 nTPM
Allen mouse:23.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026419Antibody CAB037066
Glial cells Not detectedNot detected
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.4
Sample id Sample description nTPM
Hippocampus
nTPM: 34.9
1898 Male, age 80, left hemisphere 39.4
1855 Male, age 76, left hemisphere 36.6
1911 Female, age 85, right hemisphere 35.9
2621 Female, age 67, right hemisphere 33.9
2529 Female, age 94, left hemisphere 33.4
2148 Female, age 91, left hemisphere 29.8
Dentate gyrus
nTPM: 34.6
2010 Male, age 76, both hemispheres 36.8
1927 Female, age 91, both hemispheres 36.2
2530 Female, age 94, left hemisphere 35.5
2246 Female, age 85, both hemispheres 35.1
2528 Male, age 74, both hemispheres 34.8
2531 Female, age 67, both hemispheres 29.1
Entorhinal gyrus
nTPM: 35.5
1938 Female, age 85, left hemisphere 39.7
2117 Female, age 91, right hemisphere 35.8
2613 Female, age 94, left hemisphere 35.5
1787 Male, age 76, left hemisphere 35.2
2764 Male, age 80, right hemisphere 34.6
2686 Male, age 75, right hemisphere 32.3
Hippocampus, CA1
nTPM: 35.5
2749 Male, age 80, left hemisphere 40.5
1873 Female, age 85, both hemispheres 37.1
2527 Male, age 74, both hemispheres 34.2
2045 Male, age 76, both hemispheres 34.0
2082 Female, age 91, right hemisphere 31.8
Hippocampus, CA2
nTPM: 35.0
1892 Male, age 76, both hemispheres 39.8
1963 Male, age 80, left hemisphere 37.3
2249 Male, age 74, both hemispheres 34.3
1940 Female, age 85, left hemisphere 34.1
2113 Female, age 91, right hemisphere 32.8
2437 Female, age 94, left hemisphere 31.8
Hippocampus, CA3
nTPM: 35.1
2137 Male, age 80, left hemisphere 38.4
1867 Male, age 76, both hemispheres 37.6
1891 Female, age 85, both hemispheres 36.7
2620 Female, age 94, left hemisphere 34.4
2436 Male, age 74, both hemispheres 32.1
2861 Female, age 67, both hemispheres 31.3
Parahippocampal cortex
nTPM: 36.0
1850 Male, age 80, both hemispheres 41.6
2693 Female, age 94, both hemispheres 37.5
1990 Female, age 91, right hemisphere 37.3
1933 Female, age 85, both hemispheres 36.5
2018 Male, age 76, both hemispheres 36.0
2692 Male, age 74, both hemispheres 36.0
2250 Female, age 67, right hemisphere 35.7
2245 Female, age 91, both hemispheres 35.0
2532 Female, age 72, left hemisphere 34.7
2622 Female, age 67, right hemisphere 30.3
Perirhinal gyrus
nTPM: 38.4
1841 Female, age 85, right hemisphere 40.8
1847 Female, age 91, left hemisphere 39.4
1794 Male, age 80, right hemisphere 38.4
2848 Male, age 76, right hemisphere 36.8
2521 Female, age 94, right hemisphere 36.5
Subiculum
nTPM: 35.1
1901 Male, age 80, both hemispheres 38.1
1977 Female, age 85, both hemispheres 36.8
2042 Male, age 76, both hemispheres 36.5
2729 Female, age 91, right hemisphere 33.3
2619 Male, age 74, both hemispheres 33.2
2438 Female, age 94, left hemisphere 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.7
Samples: 197

Max nTPM: 57.6
Min nTPM: 23.4
Std nTPM: 5.6
Median nTPM: 36.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 57.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 52.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 51.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 50.7
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 49.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 49.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 49.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 47.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 46.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 46.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 46.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.2
FF:10153-102I9 76 years, female 162.1
FF:10169-103B7 60 years, female 144.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.7
Samples: 4

Max nTPM: 75.2
Min nTPM: 47.7
Sample A Female 75.2
Sample B Female 60.9
Sample C Male 63.0
Sample D Male 47.7
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 63.8
Min nTPM: 47.7
Sample A Female 56.6
Sample B Female 63.8
Sample C Male 56.5
Sample D Male 47.7
Subiculum
nTPM: 59.2
Samples: 4

Max nTPM: 74.8
Min nTPM: 51.6
Sample A Female 74.8
Sample B Female 56.5
Sample C Male 51.6
Sample D Male 54.0
Ventral hippocampus
nTPM: 52.6
Samples: 4

Max nTPM: 55.1
Min nTPM: 47.5
Sample A Female 54.5
Sample B Female 47.5
Sample C Male 55.1
Sample D Male 53.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 166.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 160.1
Samples: 4

Max nTPM: 167.4
Min nTPM: 154.7
Sample A Male 154.7
Sample B Male 160.2
Sample C Female 158.0
Sample D Female 167.4
Hippocampal formation
nTPM: 166.7
Samples: 4

Max nTPM: 172.4
Min nTPM: 155.2
Sample A Male 167.9
Sample B Male 172.4
Sample C Female 171.2
Sample D Female 155.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.6
70539158 Antisense, RP_050324_01_A10, Mouse strain C57BL/6J (56 days, male) 23.6

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