COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:25.6 nTPM
HPA:15.1 nTPM
GTEx:25.6 nTPM
FANTOM5:3.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 15.1
overview
Male, age 54 		Colon sample 67
nTPM: 12.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 15.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 18.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 7.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 13
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 19.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 19.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 15.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 18.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 14.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 14.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 14.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 25.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 25.6
Samples: 373

Max nTPM: 47.0
Min nTPM: 10.1
Std nTPM: 5.3
Median nTPM: 25.8
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 47.0
GTEX-1IDJH-2826-SM-CJI49 70-79 years, male 41.1
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 38.8
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 38.7
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 37.5
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 36.9
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 36.3
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 36.1
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 35.9
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 35.8
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 35.7
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Colon - Transverse
Average nTPM: 19.0
Samples: 406

Max nTPM: 50.7
Min nTPM: 5.6
Std nTPM: 6.9
Median nTPM: 18.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 50.7
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 45.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 41.2
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 38.7
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 36.3
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 34.8
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 34.2
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 34.0
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 33.8
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 33.8
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 33.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 3.2
FF:10014-101C5 62,83,84 years, mixed 3.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.