HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.7 nTPM
HPA:28.7 nTPM
GTEx:22.0 nTPM
FANTOM5:26.1 Scaled Tags Per Million
Pig:47.5 nTPM
Mouse:17.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003438
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
1898 Male, age 80, left hemisphere 29.3
1911 Female, age 85, right hemisphere 28.5
2529 Female, age 94, left hemisphere 28.5
2621 Female, age 67, right hemisphere 27.8
1855 Male, age 76, left hemisphere 27.5
2148 Female, age 91, left hemisphere 27.0
Dentate gyrus
nTPM: 28.1
1927 Female, age 91, both hemispheres 29.3
2010 Male, age 76, both hemispheres 28.6
2528 Male, age 74, both hemispheres 28.2
2246 Female, age 85, both hemispheres 28.1
2530 Female, age 94, left hemisphere 27.7
2531 Female, age 67, both hemispheres 27.0
Entorhinal gyrus
nTPM: 27.9
2117 Female, age 91, right hemisphere 28.6
1938 Female, age 85, left hemisphere 28.2
2764 Male, age 80, right hemisphere 28.1
1787 Male, age 76, left hemisphere 28.0
2613 Female, age 94, left hemisphere 27.2
2686 Male, age 75, right hemisphere 27.1
Hippocampus, CA1
nTPM: 28.6
2082 Female, age 91, right hemisphere 29.5
2749 Male, age 80, left hemisphere 29.3
1873 Female, age 85, both hemispheres 28.7
2527 Male, age 74, both hemispheres 28.4
2045 Male, age 76, both hemispheres 27.3
Hippocampus, CA2
nTPM: 28.7
2249 Male, age 74, both hemispheres 31.3
1963 Male, age 80, left hemisphere 29.0
1940 Female, age 85, left hemisphere 28.4
2113 Female, age 91, right hemisphere 28.4
1892 Male, age 76, both hemispheres 27.9
2437 Female, age 94, left hemisphere 27.1
Hippocampus, CA3
nTPM: 28.6
2436 Male, age 74, both hemispheres 31.2
2137 Male, age 80, left hemisphere 29.5
1867 Male, age 76, both hemispheres 28.7
1891 Female, age 85, both hemispheres 28.3
2620 Female, age 94, left hemisphere 27.9
2861 Female, age 67, both hemispheres 26.3
Parahippocampal cortex
nTPM: 27.8
2250 Female, age 67, right hemisphere 28.6
1990 Female, age 91, right hemisphere 28.2
1850 Male, age 80, both hemispheres 28.1
1933 Female, age 85, both hemispheres 27.9
2245 Female, age 91, both hemispheres 27.8
2018 Male, age 76, both hemispheres 27.6
2532 Female, age 72, left hemisphere 27.6
2692 Male, age 74, both hemispheres 27.6
2693 Female, age 94, both hemispheres 27.6
2622 Female, age 67, right hemisphere 27.0
Perirhinal gyrus
nTPM: 27.8
2521 Female, age 94, right hemisphere 28.3
1794 Male, age 80, right hemisphere 27.9
1847 Female, age 91, left hemisphere 27.7
1841 Female, age 85, right hemisphere 27.6
2848 Male, age 76, right hemisphere 27.4
Subiculum
nTPM: 28.1
1901 Male, age 80, both hemispheres 28.5
2619 Male, age 74, both hemispheres 28.5
1977 Female, age 85, both hemispheres 28.4
2729 Female, age 91, right hemisphere 28.1
2042 Male, age 76, both hemispheres 27.9
2438 Female, age 94, left hemisphere 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.0
Samples: 197

Max nTPM: 50.8
Min nTPM: 10.1
Std nTPM: 5.5
Median nTPM: 21.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 50.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 43.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 38.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 37.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 35.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 35.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 34.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 34.2
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 33.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 32.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.1
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 147.3
Min nTPM: 12.9
Sample A Female 147.3
Sample B Female 13.2
Sample C Male 16.8
Sample D Male 12.9
Entorhinal cortex
nTPM: 30.5
Samples: 4

Max nTPM: 85.0
Min nTPM: 10.1
Sample A Female 85.0
Sample B Female 14.8
Sample C Male 10.1
Sample D Male 11.9
Subiculum
nTPM: 30.9
Samples: 4

Max nTPM: 91.9
Min nTPM: 9.3
Sample A Female 91.9
Sample B Female 9.3
Sample C Male 12.7
Sample D Male 9.7
Ventral hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 77.3
Min nTPM: 11.9
Sample A Female 77.3
Sample B Female 11.9
Sample C Male 15.9
Sample D Male 15.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 20.3
Min nTPM: 13.1
Sample A Male 17.8
Sample B Male 19.3
Sample C Female 20.3
Sample D Female 13.1
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.4
Sample A Male 19.6
Sample B Male 13.4
Sample C Female 18.5
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68920773 Antisense, RP_050303_01_B11, Mouse strain C57BL/6J (56 days, male) 0.0

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