HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.2 nTPM
HPA:20.2 nTPM
GTEx:13.8 nTPM
FANTOM5:51.0 Scaled Tags Per Million
Pig:48.7 nTPM
Mouse:27.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010087
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.2
Sample id Sample description nTPM
Hippocampus
nTPM: 19.7
1911 Female, age 85, right hemisphere 21.3
1855 Male, age 76, left hemisphere 20.4
2148 Female, age 91, left hemisphere 20.3
1898 Male, age 80, left hemisphere 19.9
2529 Female, age 94, left hemisphere 19.9
2621 Female, age 67, right hemisphere 16.2
Dentate gyrus
nTPM: 17.4
2010 Male, age 76, both hemispheres 25.3
2528 Male, age 74, both hemispheres 19.5
2246 Female, age 85, both hemispheres 17.3
1927 Female, age 91, both hemispheres 15.5
2530 Female, age 94, left hemisphere 14.4
2531 Female, age 67, both hemispheres 12.7
Entorhinal gyrus
nTPM: 15.2
2117 Female, age 91, right hemisphere 23.1
1787 Male, age 76, left hemisphere 18.5
1938 Female, age 85, left hemisphere 15.9
2686 Male, age 75, right hemisphere 12.8
2764 Male, age 80, right hemisphere 11.4
2613 Female, age 94, left hemisphere 9.7
Hippocampus, CA1
nTPM: 18.3
2527 Male, age 74, both hemispheres 20.4
1873 Female, age 85, both hemispheres 20.1
2045 Male, age 76, both hemispheres 19.7
2082 Female, age 91, right hemisphere 18.9
2749 Male, age 80, left hemisphere 12.6
Hippocampus, CA2
nTPM: 17.5
2249 Male, age 74, both hemispheres 20.1
2113 Female, age 91, right hemisphere 20.0
1940 Female, age 85, left hemisphere 18.7
1963 Male, age 80, left hemisphere 16.4
1892 Male, age 76, both hemispheres 15.5
2437 Female, age 94, left hemisphere 14.1
Hippocampus, CA3
nTPM: 16.3
1867 Male, age 76, both hemispheres 20.7
1891 Female, age 85, both hemispheres 20.6
2436 Male, age 74, both hemispheres 18.0
2861 Female, age 67, both hemispheres 13.4
2137 Male, age 80, left hemisphere 13.0
2620 Female, age 94, left hemisphere 11.8
Parahippocampal cortex
nTPM: 16.6
2018 Male, age 76, both hemispheres 29.2
2692 Male, age 74, both hemispheres 18.3
2250 Female, age 67, right hemisphere 16.5
1933 Female, age 85, both hemispheres 16.0
1990 Female, age 91, right hemisphere 16.0
2245 Female, age 91, both hemispheres 15.4
1850 Male, age 80, both hemispheres 14.7
2622 Female, age 67, right hemisphere 14.0
2693 Female, age 94, both hemispheres 13.7
2532 Female, age 72, left hemisphere 12.3
Perirhinal gyrus
nTPM: 14.4
1841 Female, age 85, right hemisphere 15.8
2521 Female, age 94, right hemisphere 14.8
2848 Male, age 76, right hemisphere 14.1
1794 Male, age 80, right hemisphere 13.8
1847 Female, age 91, left hemisphere 13.7
Subiculum
nTPM: 20.2
2729 Female, age 91, right hemisphere 25.3
2042 Male, age 76, both hemispheres 24.0
2619 Male, age 74, both hemispheres 20.5
2438 Female, age 94, left hemisphere 18.8
1901 Male, age 80, both hemispheres 16.7
1977 Female, age 85, both hemispheres 16.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 49.1
Min nTPM: 5.8
Std nTPM: 5.6
Median nTPM: 12.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 49.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 48.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 30.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 27.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 27.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 25.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 24.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 24.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 23.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 22.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 21.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.0
FF:10153-102I9 76 years, female 65.4
FF:10169-103B7 60 years, female 36.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.3
Samples: 4

Max nTPM: 52.1
Min nTPM: 32.2
Sample A Female 48.1
Sample B Female 36.9
Sample C Male 52.1
Sample D Male 32.2
Entorhinal cortex
nTPM: 35.2
Samples: 4

Max nTPM: 40.0
Min nTPM: 29.6
Sample A Female 33.7
Sample B Female 37.5
Sample C Male 40.0
Sample D Male 29.6
Subiculum
nTPM: 48.7
Samples: 4

Max nTPM: 52.1
Min nTPM: 44.3
Sample A Female 52.1
Sample B Female 51.5
Sample C Male 47.0
Sample D Male 44.3
Ventral hippocampus
nTPM: 42.7
Samples: 4

Max nTPM: 46.6
Min nTPM: 38.9
Sample A Female 42.7
Sample B Female 42.6
Sample C Male 46.6
Sample D Male 38.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 30.2
Min nTPM: 25.0
Sample A Male 30.2
Sample B Male 25.0
Sample C Female 27.2
Sample D Female 25.8
Hippocampal formation
nTPM: 24.9
Samples: 4

Max nTPM: 27.3
Min nTPM: 23.1
Sample A Male 27.3
Sample B Male 25.2
Sample C Female 23.1
Sample D Female 23.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.