HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:87.5 nTPM
HPA:87.5 nTPM
GTEx:90.2 nTPM
FANTOM5:169.5 Scaled Tags Per Million
Pig:27.9 nTPM
Mouse:150.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003239
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.5
Sample id Sample description nTPM
Hippocampus
nTPM: 66.0
1898 Male, age 80, left hemisphere 85.3
2621 Female, age 67, right hemisphere 65.9
1855 Male, age 76, left hemisphere 64.2
2529 Female, age 94, left hemisphere 62.0
1911 Female, age 85, right hemisphere 60.7
2148 Female, age 91, left hemisphere 57.7
Dentate gyrus
nTPM: 68.4
1927 Female, age 91, both hemispheres 76.2
2010 Male, age 76, both hemispheres 70.0
2530 Female, age 94, left hemisphere 69.0
2246 Female, age 85, both hemispheres 68.5
2528 Male, age 74, both hemispheres 65.2
2531 Female, age 67, both hemispheres 61.4
Entorhinal gyrus
nTPM: 67.9
2764 Male, age 80, right hemisphere 80.4
1938 Female, age 85, left hemisphere 74.4
1787 Male, age 76, left hemisphere 71.5
2613 Female, age 94, left hemisphere 67.3
2117 Female, age 91, right hemisphere 58.0
2686 Male, age 75, right hemisphere 55.5
Hippocampus, CA1
nTPM: 74.1
2749 Male, age 80, left hemisphere 98.6
1873 Female, age 85, both hemispheres 75.1
2527 Male, age 74, both hemispheres 66.6
2045 Male, age 76, both hemispheres 66.0
2082 Female, age 91, right hemisphere 64.3
Hippocampus, CA2
nTPM: 71.1
1892 Male, age 76, both hemispheres 86.6
1963 Male, age 80, left hemisphere 76.3
2249 Male, age 74, both hemispheres 70.9
1940 Female, age 85, left hemisphere 69.5
2437 Female, age 94, left hemisphere 61.8
2113 Female, age 91, right hemisphere 61.7
Hippocampus, CA3
nTPM: 68.4
2137 Male, age 80, left hemisphere 84.2
1867 Male, age 76, both hemispheres 75.1
2436 Male, age 74, both hemispheres 68.3
1891 Female, age 85, both hemispheres 66.7
2620 Female, age 94, left hemisphere 62.1
2861 Female, age 67, both hemispheres 54.3
Parahippocampal cortex
nTPM: 71.0
1850 Male, age 80, both hemispheres 93.6
1933 Female, age 85, both hemispheres 76.2
1990 Female, age 91, right hemisphere 74.2
2250 Female, age 67, right hemisphere 72.2
2245 Female, age 91, both hemispheres 71.9
2693 Female, age 94, both hemispheres 68.4
2018 Male, age 76, both hemispheres 68.3
2532 Female, age 72, left hemisphere 67.1
2692 Male, age 74, both hemispheres 61.1
2622 Female, age 67, right hemisphere 57.0
Perirhinal gyrus
nTPM: 87.5
1847 Female, age 91, left hemisphere 94.8
1794 Male, age 80, right hemisphere 94.3
1841 Female, age 85, right hemisphere 89.2
2521 Female, age 94, right hemisphere 85.0
2848 Male, age 76, right hemisphere 74.3
Subiculum
nTPM: 64.7
1977 Female, age 85, both hemispheres 74.9
1901 Male, age 80, both hemispheres 72.8
2438 Female, age 94, left hemisphere 62.5
2042 Male, age 76, both hemispheres 61.0
2619 Male, age 74, both hemispheres 60.5
2729 Female, age 91, right hemisphere 56.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 90.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.2
Samples: 197

Max nTPM: 248.0
Min nTPM: 28.0
Std nTPM: 37.4
Median nTPM: 79.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 248.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 208.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 203.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 179.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 174.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 174.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 170.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 166.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 165.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 164.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 164.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.5
FF:10169-103B7 60 years, female 228.1
FF:10153-102I9 76 years, female 110.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.9
Samples: 4

Max nTPM: 37.7
Min nTPM: 20.0
Sample A Female 37.7
Sample B Female 30.6
Sample C Male 23.2
Sample D Male 20.0
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 33.1
Min nTPM: 21.5
Sample A Female 27.5
Sample B Female 33.1
Sample C Male 24.8
Sample D Male 21.5
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 28.4
Min nTPM: 18.7
Sample A Female 28.4
Sample B Female 19.1
Sample C Male 18.7
Sample D Male 19.6
Ventral hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 28.2
Min nTPM: 16.9
Sample A Female 25.3
Sample B Female 16.9
Sample C Male 20.2
Sample D Male 28.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 150.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 150.0
Samples: 4

Max nTPM: 161.3
Min nTPM: 140.1
Sample A Male 147.8
Sample B Male 161.3
Sample C Female 140.1
Sample D Female 150.6
Hippocampal formation
nTPM: 146.4
Samples: 4

Max nTPM: 163.1
Min nTPM: 138.9
Sample A Male 163.1
Sample B Male 143.6
Sample C Female 138.9
Sample D Female 139.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
73423926 Antisense, RP_051019_03_B08, Mouse strain C57BL/6J (56 days, male) 0.2

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