HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.7 nTPM
HPA:7.7 nTPM
GTEx:6.9 nTPM
FANTOM5:34.2 Scaled Tags Per Million
Pig:15.0 nTPM
Mouse:16.9 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038355
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.7
Sample id Sample description nTPM
Hippocampus
nTPM: 6.9
1911 Female, age 85, right hemisphere 8.4
2529 Female, age 94, left hemisphere 7.9
1898 Male, age 80, left hemisphere 7.1
2621 Female, age 67, right hemisphere 7.0
1855 Male, age 76, left hemisphere 5.8
2148 Female, age 91, left hemisphere 5.2
Dentate gyrus
nTPM: 6.4
2530 Female, age 94, left hemisphere 8.2
1927 Female, age 91, both hemispheres 7.0
2246 Female, age 85, both hemispheres 6.8
2010 Male, age 76, both hemispheres 6.5
2528 Male, age 74, both hemispheres 5.0
2531 Female, age 67, both hemispheres 4.7
Entorhinal gyrus
nTPM: 6.4
2117 Female, age 91, right hemisphere 8.4
2764 Male, age 80, right hemisphere 7.2
2686 Male, age 75, right hemisphere 6.6
1938 Female, age 85, left hemisphere 5.8
1787 Male, age 76, left hemisphere 5.7
2613 Female, age 94, left hemisphere 4.8
Hippocampus, CA1
nTPM: 6.9
2749 Male, age 80, left hemisphere 10.5
2527 Male, age 74, both hemispheres 7.4
1873 Female, age 85, both hemispheres 7.3
2082 Female, age 91, right hemisphere 6.7
2045 Male, age 76, both hemispheres 2.6
Hippocampus, CA2
nTPM: 7.6
1963 Male, age 80, left hemisphere 8.6
2437 Female, age 94, left hemisphere 8.5
1892 Male, age 76, both hemispheres 8.3
2113 Female, age 91, right hemisphere 7.0
1940 Female, age 85, left hemisphere 6.7
2249 Male, age 74, both hemispheres 6.6
Hippocampus, CA3
nTPM: 6.2
2137 Male, age 80, left hemisphere 9.4
1867 Male, age 76, both hemispheres 7.3
1891 Female, age 85, both hemispheres 7.3
2436 Male, age 74, both hemispheres 5.1
2861 Female, age 67, both hemispheres 4.8
2620 Female, age 94, left hemisphere 3.2
Parahippocampal cortex
nTPM: 6.9
2245 Female, age 91, both hemispheres 8.1
2250 Female, age 67, right hemisphere 7.5
1990 Female, age 91, right hemisphere 7.2
2532 Female, age 72, left hemisphere 7.1
2018 Male, age 76, both hemispheres 6.9
2622 Female, age 67, right hemisphere 6.9
1933 Female, age 85, both hemispheres 6.8
2693 Female, age 94, both hemispheres 6.6
1850 Male, age 80, both hemispheres 6.2
2692 Male, age 74, both hemispheres 5.7
Perirhinal gyrus
nTPM: 6.8
1841 Female, age 85, right hemisphere 7.6
2521 Female, age 94, right hemisphere 7.2
2848 Male, age 76, right hemisphere 6.7
1794 Male, age 80, right hemisphere 6.6
1847 Female, age 91, left hemisphere 5.9
Subiculum
nTPM: 7.7
1901 Male, age 80, both hemispheres 9.9
2438 Female, age 94, left hemisphere 9.7
1977 Female, age 85, both hemispheres 7.9
2042 Male, age 76, both hemispheres 7.4
2619 Male, age 74, both hemispheres 6.2
2729 Female, age 91, right hemisphere 4.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.9
Samples: 197

Max nTPM: 14.0
Min nTPM: 2.6
Std nTPM: 1.7
Median nTPM: 6.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 14.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 12.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 12.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 11.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 11.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 10.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 10.4
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 10.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 9.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 9.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 9.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.2
FF:10153-102I9 76 years, female 46.5
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 14.1
Sample A Female 16.3
Sample B Female 14.5
Sample C Male 14.1
Sample D Male 15.0
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 13.7
Min nTPM: 11.7
Sample A Female 12.2
Sample B Female 13.7
Sample C Male 11.7
Sample D Male 13.0
Subiculum
nTPM: 12.8
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.5
Sample A Female 16.0
Sample B Female 13.2
Sample C Male 11.6
Sample D Male 10.5
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 15.7
Min nTPM: 11.1
Sample A Female 11.1
Sample B Female 12.3
Sample C Male 13.2
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 16.5
Min nTPM: 11.9
Sample A Male 13.1
Sample B Male 11.9
Sample C Female 16.5
Sample D Female 14.4
Hippocampal formation
nTPM: 16.9
Samples: 4

Max nTPM: 19.8
Min nTPM: 15.1
Sample A Male 15.1
Sample B Male 17.6
Sample C Female 19.8
Sample D Female 15.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
68744438 Antisense, RP_050203_02_H08, Mouse strain C57BL/6J (56 days, male) 12.0

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