HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.1 nTPM
HPA:12.1 nTPM
GTEx:10.7 nTPM
FANTOM5:95.0 Scaled Tags Per Million
Pig:39.3 nTPM
Mouse:16.5 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 11.9
1898 Male, age 80, left hemisphere 13.2
1855 Male, age 76, left hemisphere 12.2
2529 Female, age 94, left hemisphere 12.0
1911 Female, age 85, right hemisphere 11.6
2148 Female, age 91, left hemisphere 11.3
2621 Female, age 67, right hemisphere 11.3
Dentate gyrus
nTPM: 11.8
2530 Female, age 94, left hemisphere 13.2
1927 Female, age 91, both hemispheres 12.4
2010 Male, age 76, both hemispheres 12.1
2528 Male, age 74, both hemispheres 11.5
2246 Female, age 85, both hemispheres 11.3
2531 Female, age 67, both hemispheres 10.5
Entorhinal gyrus
nTPM: 11.3
1938 Female, age 85, left hemisphere 12.7
2117 Female, age 91, right hemisphere 11.9
1787 Male, age 76, left hemisphere 11.7
2686 Male, age 75, right hemisphere 11.1
2764 Male, age 80, right hemisphere 10.8
2613 Female, age 94, left hemisphere 9.8
Hippocampus, CA1
nTPM: 12.0
2749 Male, age 80, left hemisphere 14.3
1873 Female, age 85, both hemispheres 12.4
2527 Male, age 74, both hemispheres 11.9
2082 Female, age 91, right hemisphere 10.7
2045 Male, age 76, both hemispheres 10.6
Hippocampus, CA2
nTPM: 12.1
1892 Male, age 76, both hemispheres 13.8
1963 Male, age 80, left hemisphere 12.6
2249 Male, age 74, both hemispheres 11.9
2437 Female, age 94, left hemisphere 11.8
2113 Female, age 91, right hemisphere 11.5
1940 Female, age 85, left hemisphere 10.9
Hippocampus, CA3
nTPM: 11.5
2137 Male, age 80, left hemisphere 13.9
1867 Male, age 76, both hemispheres 12.7
1891 Female, age 85, both hemispheres 11.6
2436 Male, age 74, both hemispheres 10.4
2861 Female, age 67, both hemispheres 10.3
2620 Female, age 94, left hemisphere 9.8
Parahippocampal cortex
nTPM: 11.2
1850 Male, age 80, both hemispheres 12.5
2692 Male, age 74, both hemispheres 11.7
1933 Female, age 85, both hemispheres 11.6
2245 Female, age 91, both hemispheres 11.6
1990 Female, age 91, right hemisphere 11.4
2250 Female, age 67, right hemisphere 11.1
2018 Male, age 76, both hemispheres 10.9
2693 Female, age 94, both hemispheres 10.8
2532 Female, age 72, left hemisphere 10.7
2622 Female, age 67, right hemisphere 10.0
Perirhinal gyrus
nTPM: 11.7
1841 Female, age 85, right hemisphere 12.5
2848 Male, age 76, right hemisphere 12.2
1847 Female, age 91, left hemisphere 11.9
1794 Male, age 80, right hemisphere 11.8
2521 Female, age 94, right hemisphere 10.4
Subiculum
nTPM: 12.0
2438 Female, age 94, left hemisphere 13.2
1901 Male, age 80, both hemispheres 12.6
2729 Female, age 91, right hemisphere 12.0
1977 Female, age 85, both hemispheres 11.8
2042 Male, age 76, both hemispheres 11.8
2619 Male, age 74, both hemispheres 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.7
Samples: 197

Max nTPM: 26.4
Min nTPM: 3.4
Std nTPM: 3.5
Median nTPM: 10.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 26.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 22.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 22.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 21.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 21.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 19.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 19.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 17.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 17.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 17.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 16.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.0
FF:10169-103B7 60 years, female 129.7
FF:10153-102I9 76 years, female 60.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.3
Samples: 4

Max nTPM: 51.0
Min nTPM: 29.4
Sample A Female 51.0
Sample B Female 39.3
Sample C Male 37.3
Sample D Male 29.4
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 28.7
Min nTPM: 22.0
Sample A Female 27.6
Sample B Female 28.7
Sample C Male 22.0
Sample D Male 23.6
Subiculum
nTPM: 29.8
Samples: 4

Max nTPM: 36.1
Min nTPM: 24.0
Sample A Female 36.1
Sample B Female 32.1
Sample C Male 24.0
Sample D Male 27.1
Ventral hippocampus
nTPM: 34.0
Samples: 4

Max nTPM: 39.2
Min nTPM: 28.7
Sample A Female 39.2
Sample B Female 28.7
Sample C Male 30.5
Sample D Male 37.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.6
Sample A Male 18.1
Sample B Male 16.3
Sample C Female 16.0
Sample D Female 13.6
Hippocampal formation
nTPM: 16.5
Samples: 4

Max nTPM: 16.9
Min nTPM: 15.4
Sample A Male 16.6
Sample B Male 16.9
Sample C Female 16.9
Sample D Female 15.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
68744683 Antisense, RP_050208_01_D08, Mouse strain C57BL/6J (56 days, male) 6.1

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