HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.2 nTPM
HPA:13.2 nTPM
GTEx:12.1 nTPM
FANTOM5:16.6 Scaled Tags Per Million
Pig:45.9 nTPM
Mouse:25.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023094Antibody HPA023660
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
2529 Female, age 94, left hemisphere 13.9
1911 Female, age 85, right hemisphere 13.2
1898 Male, age 80, left hemisphere 12.5
2621 Female, age 67, right hemisphere 12.4
2148 Female, age 91, left hemisphere 11.8
1855 Male, age 76, left hemisphere 11.5
Dentate gyrus
nTPM: 12.5
2528 Male, age 74, both hemispheres 13.5
2010 Male, age 76, both hemispheres 13.0
2246 Female, age 85, both hemispheres 12.9
2530 Female, age 94, left hemisphere 12.1
1927 Female, age 91, both hemispheres 11.9
2531 Female, age 67, both hemispheres 11.3
Entorhinal gyrus
nTPM: 11.8
2117 Female, age 91, right hemisphere 12.7
2686 Male, age 75, right hemisphere 12.2
1787 Male, age 76, left hemisphere 12.1
1938 Female, age 85, left hemisphere 11.7
2764 Male, age 80, right hemisphere 11.4
2613 Female, age 94, left hemisphere 10.7
Hippocampus, CA1
nTPM: 12.4
2082 Female, age 91, right hemisphere 14.8
1873 Female, age 85, both hemispheres 12.6
2527 Male, age 74, both hemispheres 12.5
2045 Male, age 76, both hemispheres 11.1
2749 Male, age 80, left hemisphere 10.8
Hippocampus, CA2
nTPM: 13.2
2249 Male, age 74, both hemispheres 17.1
1940 Female, age 85, left hemisphere 14.4
2113 Female, age 91, right hemisphere 13.3
1892 Male, age 76, both hemispheres 11.9
2437 Female, age 94, left hemisphere 11.7
1963 Male, age 80, left hemisphere 11.0
Hippocampus, CA3
nTPM: 13.2
2436 Male, age 74, both hemispheres 21.2
1891 Female, age 85, both hemispheres 13.0
2620 Female, age 94, left hemisphere 11.7
1867 Male, age 76, both hemispheres 11.5
2137 Male, age 80, left hemisphere 10.9
2861 Female, age 67, both hemispheres 10.7
Parahippocampal cortex
nTPM: 12.0
2692 Male, age 74, both hemispheres 13.4
2250 Female, age 67, right hemisphere 12.7
2018 Male, age 76, both hemispheres 12.3
1850 Male, age 80, both hemispheres 12.1
1990 Female, age 91, right hemisphere 11.9
2622 Female, age 67, right hemisphere 11.9
1933 Female, age 85, both hemispheres 11.7
2532 Female, age 72, left hemisphere 11.5
2693 Female, age 94, both hemispheres 11.3
2245 Female, age 91, both hemispheres 11.2
Perirhinal gyrus
nTPM: 11.4
1794 Male, age 80, right hemisphere 12.3
1847 Female, age 91, left hemisphere 11.5
1841 Female, age 85, right hemisphere 11.2
2521 Female, age 94, right hemisphere 11.0
2848 Male, age 76, right hemisphere 10.9
Subiculum
nTPM: 12.4
2729 Female, age 91, right hemisphere 13.2
2619 Male, age 74, both hemispheres 12.8
1901 Male, age 80, both hemispheres 12.2
2438 Female, age 94, left hemisphere 12.1
2042 Male, age 76, both hemispheres 12.0
1977 Female, age 85, both hemispheres 11.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 35.4
Min nTPM: 3.3
Std nTPM: 5.1
Median nTPM: 10.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 35.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 34.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 28.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 27.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 25.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 25.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 24.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 23.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 23.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 23.2
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 23.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.6
FF:10169-103B7 60 years, female 19.8
FF:10153-102I9 76 years, female 13.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.3
Samples: 4

Max nTPM: 45.0
Min nTPM: 35.2
Sample A Female 45.0
Sample B Female 36.6
Sample C Male 44.3
Sample D Male 35.2
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 43.8
Min nTPM: 25.8
Sample A Female 35.5
Sample B Female 43.8
Sample C Male 42.0
Sample D Male 25.8
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 53.4
Min nTPM: 37.8
Sample A Female 53.4
Sample B Female 52.1
Sample C Male 40.5
Sample D Male 37.8
Ventral hippocampus
nTPM: 42.9
Samples: 4

Max nTPM: 50.8
Min nTPM: 33.2
Sample A Female 41.8
Sample B Female 45.6
Sample C Male 50.8
Sample D Male 33.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 27.7
Min nTPM: 22.5
Sample A Male 27.7
Sample B Male 22.5
Sample C Female 24.1
Sample D Female 26.6
Hippocampal formation
nTPM: 20.9
Samples: 4

Max nTPM: 23.1
Min nTPM: 19.5
Sample A Male 23.1
Sample B Male 19.7
Sample C Female 19.5
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
79749555 Antisense, RP_071204_02_C05, Mouse strain C57BL/6J (56 days, male) 0.3
70813923 Antisense, RP_050725_02_F03, Mouse strain C57BL/6J (56 days, male) 0.3

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