HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:69.4 nTPM
HPA:69.4 nTPM
GTEx:79.7 nTPM
FANTOM5:116.8 Scaled Tags Per Million
Pig:33.6 nTPM
Mouse:88.4 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017284Antibody CAB003703
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.4
Sample id Sample description nTPM
Hippocampus
nTPM: 68.7
2148 Female, age 91, left hemisphere 71.1
2529 Female, age 94, left hemisphere 70.2
1911 Female, age 85, right hemisphere 69.7
1898 Male, age 80, left hemisphere 69.1
2621 Female, age 67, right hemisphere 67.6
1855 Male, age 76, left hemisphere 64.6
Dentate gyrus
nTPM: 67.9
2531 Female, age 67, both hemispheres 70.9
2528 Male, age 74, both hemispheres 68.7
2246 Female, age 85, both hemispheres 68.1
2530 Female, age 94, left hemisphere 67.8
1927 Female, age 91, both hemispheres 67.6
2010 Male, age 76, both hemispheres 64.7
Entorhinal gyrus
nTPM: 68.5
2686 Male, age 75, right hemisphere 72.4
1938 Female, age 85, left hemisphere 70.3
2117 Female, age 91, right hemisphere 70.1
2764 Male, age 80, right hemisphere 68.0
1787 Male, age 76, left hemisphere 67.3
2613 Female, age 94, left hemisphere 63.0
Hippocampus, CA1
nTPM: 69.0
2749 Male, age 80, left hemisphere 71.9
1873 Female, age 85, both hemispheres 70.5
2082 Female, age 91, right hemisphere 69.3
2527 Male, age 74, both hemispheres 66.8
2045 Male, age 76, both hemispheres 66.6
Hippocampus, CA2
nTPM: 67.3
1963 Male, age 80, left hemisphere 68.7
2249 Male, age 74, both hemispheres 68.3
2113 Female, age 91, right hemisphere 68.2
1940 Female, age 85, left hemisphere 67.5
1892 Male, age 76, both hemispheres 66.8
2437 Female, age 94, left hemisphere 64.5
Hippocampus, CA3
nTPM: 67.4
1891 Female, age 85, both hemispheres 72.6
2137 Male, age 80, left hemisphere 70.2
1867 Male, age 76, both hemispheres 68.1
2436 Male, age 74, both hemispheres 67.5
2861 Female, age 67, both hemispheres 63.9
2620 Female, age 94, left hemisphere 62.3
Parahippocampal cortex
nTPM: 68.1
1850 Male, age 80, both hemispheres 71.8
2692 Male, age 74, both hemispheres 71.2
1933 Female, age 85, both hemispheres 69.4
2532 Female, age 72, left hemisphere 69.3
1990 Female, age 91, right hemisphere 68.5
2245 Female, age 91, both hemispheres 68.3
2018 Male, age 76, both hemispheres 66.2
2250 Female, age 67, right hemisphere 65.5
2622 Female, age 67, right hemisphere 65.5
2693 Female, age 94, both hemispheres 64.8
Perirhinal gyrus
nTPM: 69.2
2848 Male, age 76, right hemisphere 71.2
1841 Female, age 85, right hemisphere 70.7
1794 Male, age 80, right hemisphere 69.8
1847 Female, age 91, left hemisphere 67.9
2521 Female, age 94, right hemisphere 66.3
Subiculum
nTPM: 69.4
1901 Male, age 80, both hemispheres 72.9
1977 Female, age 85, both hemispheres 70.2
2042 Male, age 76, both hemispheres 69.4
2438 Female, age 94, left hemisphere 68.4
2729 Female, age 91, right hemisphere 68.1
2619 Male, age 74, both hemispheres 67.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.7
Samples: 197

Max nTPM: 166.1
Min nTPM: 52.3
Std nTPM: 14.9
Median nTPM: 76.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 166.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 130.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 125.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 122.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 118.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 118.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 117.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 113.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 113.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 110.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 108.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.8
FF:10169-103B7 60 years, female 117.1
FF:10153-102I9 76 years, female 116.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 35.5
Min nTPM: 31.9
Sample A Female 34.6
Sample B Female 31.9
Sample C Male 35.5
Sample D Male 32.5
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 35.3
Min nTPM: 28.4
Sample A Female 28.4
Sample B Female 35.3
Sample C Male 30.7
Sample D Male 28.4
Subiculum
nTPM: 32.7
Samples: 4

Max nTPM: 36.2
Min nTPM: 30.2
Sample A Female 36.2
Sample B Female 32.2
Sample C Male 30.2
Sample D Male 32.0
Ventral hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 32.6
Min nTPM: 27.5
Sample A Female 32.2
Sample B Female 30.8
Sample C Male 27.5
Sample D Male 32.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 88.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 75.5
Samples: 4

Max nTPM: 85.9
Min nTPM: 70.5
Sample A Male 70.5
Sample B Male 85.9
Sample C Female 74.9
Sample D Female 70.5
Hippocampal formation
nTPM: 88.4
Samples: 4

Max nTPM: 101.2
Min nTPM: 79.8
Sample A Male 79.8
Sample B Male 101.2
Sample C Female 84.9
Sample D Female 87.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
68157419 Antisense, RP_041116_02_F12, Mouse strain C57BL/6J (56 days, male) 9.2

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