HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.8 nTPM
HPA:11.8 nTPM
GTEx:14.7 nTPM
FANTOM5:41.9 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:20.1 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038904
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.8
Sample id Sample description nTPM
Hippocampus
nTPM: 8.9
2148 Female, age 91, left hemisphere 11.5
1898 Male, age 80, left hemisphere 11.1
2621 Female, age 67, right hemisphere 10.5
1911 Female, age 85, right hemisphere 8.4
1855 Male, age 76, left hemisphere 6.9
2529 Female, age 94, left hemisphere 5.1
Dentate gyrus
nTPM: 10.5
1927 Female, age 91, both hemispheres 14.5
2531 Female, age 67, both hemispheres 12.0
2528 Male, age 74, both hemispheres 10.7
2010 Male, age 76, both hemispheres 9.5
2246 Female, age 85, both hemispheres 9.1
2530 Female, age 94, left hemisphere 7.5
Entorhinal gyrus
nTPM: 10.5
2764 Male, age 80, right hemisphere 15.4
2613 Female, age 94, left hemisphere 12.7
1938 Female, age 85, left hemisphere 9.3
2686 Male, age 75, right hemisphere 9.3
2117 Female, age 91, right hemisphere 9.1
1787 Male, age 76, left hemisphere 7.4
Hippocampus, CA1
nTPM: 8.9
2749 Male, age 80, left hemisphere 13.6
1873 Female, age 85, both hemispheres 10.2
2527 Male, age 74, both hemispheres 7.2
2045 Male, age 76, both hemispheres 6.8
2082 Female, age 91, right hemisphere 6.8
Hippocampus, CA2
nTPM: 9.0
1963 Male, age 80, left hemisphere 12.6
2249 Male, age 74, both hemispheres 11.7
2113 Female, age 91, right hemisphere 8.8
1940 Female, age 85, left hemisphere 8.0
1892 Male, age 76, both hemispheres 7.7
2437 Female, age 94, left hemisphere 5.3
Hippocampus, CA3
nTPM: 10.4
2620 Female, age 94, left hemisphere 14.0
2137 Male, age 80, left hemisphere 11.7
2861 Female, age 67, both hemispheres 9.6
2436 Male, age 74, both hemispheres 9.2
1867 Male, age 76, both hemispheres 9.0
1891 Female, age 85, both hemispheres 8.8
Parahippocampal cortex
nTPM: 10.2
2693 Female, age 94, both hemispheres 13.1
1990 Female, age 91, right hemisphere 11.8
2532 Female, age 72, left hemisphere 11.4
2250 Female, age 67, right hemisphere 11.2
1850 Male, age 80, both hemispheres 10.8
2245 Female, age 91, both hemispheres 10.4
1933 Female, age 85, both hemispheres 10.0
2622 Female, age 67, right hemisphere 9.2
2018 Male, age 76, both hemispheres 7.7
2692 Male, age 74, both hemispheres 6.6
Perirhinal gyrus
nTPM: 11.8
1847 Female, age 91, left hemisphere 13.4
2521 Female, age 94, right hemisphere 13.3
1794 Male, age 80, right hemisphere 11.8
1841 Female, age 85, right hemisphere 11.7
2848 Male, age 76, right hemisphere 8.7
Subiculum
nTPM: 8.5
1977 Female, age 85, both hemispheres 10.4
2729 Female, age 91, right hemisphere 9.8
1901 Male, age 80, both hemispheres 9.2
2438 Female, age 94, left hemisphere 8.4
2042 Male, age 76, both hemispheres 6.8
2619 Male, age 74, both hemispheres 6.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.7
Samples: 197

Max nTPM: 33.6
Min nTPM: 3.1
Std nTPM: 5.3
Median nTPM: 14.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 33.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 29.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 28.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 26.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 26.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 25.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 25.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 25.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 24.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.9
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 38.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 33.7
Min nTPM: 30.6
Sample A Female 31.6
Sample B Female 31.5
Sample C Male 30.6
Sample D Male 33.7
Entorhinal cortex
nTPM: 33.5
Samples: 4

Max nTPM: 37.5
Min nTPM: 28.7
Sample A Female 34.7
Sample B Female 37.5
Sample C Male 28.7
Sample D Male 33.2
Subiculum
nTPM: 32.7
Samples: 4

Max nTPM: 35.8
Min nTPM: 29.4
Sample A Female 35.8
Sample B Female 33.5
Sample C Male 29.4
Sample D Male 32.1
Ventral hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 32.7
Min nTPM: 30.0
Sample A Female 32.7
Sample B Female 31.8
Sample C Male 30.0
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 21.0
Min nTPM: 17.9
Sample A Male 19.9
Sample B Male 18.8
Sample C Female 21.0
Sample D Female 17.9
Hippocampal formation
nTPM: 20.2
Samples: 4

Max nTPM: 21.8
Min nTPM: 18.6
Sample A Male 21.8
Sample B Male 19.6
Sample C Female 20.6
Sample D Female 18.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
71656122 Antisense, RP_050927_03_H06, Mouse strain C57BL/6J (56 days, male) 15.9

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The Human Protein Atlas

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