HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:52.0 nTPM
HPA:52.0 nTPM
GTEx:132.6 nTPM
FANTOM5:192.8 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:203.0 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055754Antibody CAB017830
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.0
Sample id Sample description nTPM
Hippocampus
nTPM: 38.0
1898 Male, age 80, left hemisphere 50.2
2621 Female, age 67, right hemisphere 40.9
1855 Male, age 76, left hemisphere 38.4
2148 Female, age 91, left hemisphere 37.0
1911 Female, age 85, right hemisphere 32.5
2529 Female, age 94, left hemisphere 28.8
Dentate gyrus
nTPM: 43.2
2010 Male, age 76, both hemispheres 56.0
2530 Female, age 94, left hemisphere 51.9
1927 Female, age 91, both hemispheres 42.6
2246 Female, age 85, both hemispheres 39.7
2531 Female, age 67, both hemispheres 37.0
2528 Male, age 74, both hemispheres 32.2
Entorhinal gyrus
nTPM: 32.6
2764 Male, age 80, right hemisphere 42.8
1787 Male, age 76, left hemisphere 33.1
2686 Male, age 75, right hemisphere 32.1
1938 Female, age 85, left hemisphere 31.2
2613 Female, age 94, left hemisphere 28.4
2117 Female, age 91, right hemisphere 28.0
Hippocampus, CA1
nTPM: 52.0
2749 Male, age 80, left hemisphere 105.3
2045 Male, age 76, both hemispheres 49.7
1873 Female, age 85, both hemispheres 42.5
2527 Male, age 74, both hemispheres 35.5
2082 Female, age 91, right hemisphere 27.4
Hippocampus, CA2
nTPM: 41.2
1963 Male, age 80, left hemisphere 63.0
1892 Male, age 76, both hemispheres 55.8
2437 Female, age 94, left hemisphere 36.2
2249 Male, age 74, both hemispheres 34.6
2113 Female, age 91, right hemisphere 29.7
1940 Female, age 85, left hemisphere 28.0
Hippocampus, CA3
nTPM: 40.7
2137 Male, age 80, left hemisphere 59.0
2620 Female, age 94, left hemisphere 48.4
1867 Male, age 76, both hemispheres 45.1
2861 Female, age 67, both hemispheres 34.6
2436 Male, age 74, both hemispheres 29.3
1891 Female, age 85, both hemispheres 27.8
Parahippocampal cortex
nTPM: 35.5
2250 Female, age 67, right hemisphere 38.9
2532 Female, age 72, left hemisphere 38.3
1850 Male, age 80, both hemispheres 38.1
1933 Female, age 85, both hemispheres 37.6
2245 Female, age 91, both hemispheres 37.5
2693 Female, age 94, both hemispheres 36.7
2622 Female, age 67, right hemisphere 35.1
1990 Female, age 91, right hemisphere 32.8
2018 Male, age 76, both hemispheres 31.8
2692 Male, age 74, both hemispheres 27.9
Perirhinal gyrus
nTPM: 39.6
2521 Female, age 94, right hemisphere 45.6
1794 Male, age 80, right hemisphere 40.7
2848 Male, age 76, right hemisphere 40.6
1847 Female, age 91, left hemisphere 37.6
1841 Female, age 85, right hemisphere 33.3
Subiculum
nTPM: 33.7
1901 Male, age 80, both hemispheres 36.8
1977 Female, age 85, both hemispheres 35.9
2042 Male, age 76, both hemispheres 35.8
2438 Female, age 94, left hemisphere 33.3
2729 Female, age 91, right hemisphere 32.6
2619 Male, age 74, both hemispheres 27.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 132.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 132.6
Samples: 197

Max nTPM: 587.9
Min nTPM: 13.3
Std nTPM: 102.2
Median nTPM: 102.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 587.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 493.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 431.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 404.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 386.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 380.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 380.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 356.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 347.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 334.5
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 332.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 192.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 192.8
FF:10169-103B7 60 years, female 320.1
FF:10153-102I9 76 years, female 65.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 32.4
Min nTPM: 10.9
Sample A Female 32.4
Sample B Female 21.3
Sample C Male 10.9
Sample D Male 17.9
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 23.0
Min nTPM: 13.3
Sample A Female 21.8
Sample B Female 23.0
Sample C Male 13.3
Sample D Male 20.6
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 22.7
Min nTPM: 10.8
Sample A Female 22.7
Sample B Female 15.7
Sample C Male 10.8
Sample D Male 19.1
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 24.7
Min nTPM: 9.0
Sample A Female 24.7
Sample B Female 9.0
Sample C Male 14.7
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 203.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 203.1
Samples: 4

Max nTPM: 227.1
Min nTPM: 181.7
Sample A Male 201.3
Sample B Male 227.1
Sample C Female 181.7
Sample D Female 202.1
Hippocampal formation
nTPM: 151.7
Samples: 4

Max nTPM: 169.2
Min nTPM: 142.9
Sample A Male 169.2
Sample B Male 145.6
Sample C Female 142.9
Sample D Female 149.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68076552 Antisense, RP_040923_02_G01, Mouse strain C57BL/6J (56 days, male) 1.0
418 Antisense, RP_Baylor_102768, Mouse strain C57BL/6J (56 days, male) 0.4

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