HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:121.8 nTPM
HPA:121.8 nTPM
GTEx:120.0 nTPM
FANTOM5:207.9 Scaled Tags Per Million
Pig:56.2 nTPM
Mouse:186.7 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009025Antibody HPA024565
Glial cells HighLow
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.8
Sample id Sample description nTPM
Hippocampus
nTPM: 105.5
1898 Male, age 80, left hemisphere 116.8
2621 Female, age 67, right hemisphere 109.6
2529 Female, age 94, left hemisphere 108.0
1855 Male, age 76, left hemisphere 106.0
2148 Female, age 91, left hemisphere 97.5
1911 Female, age 85, right hemisphere 95.1
Dentate gyrus
nTPM: 100.9
2010 Male, age 76, both hemispheres 122.4
2530 Female, age 94, left hemisphere 111.7
2528 Male, age 74, both hemispheres 104.3
1927 Female, age 91, both hemispheres 96.9
2246 Female, age 85, both hemispheres 90.6
2531 Female, age 67, both hemispheres 79.4
Entorhinal gyrus
nTPM: 95.6
2764 Male, age 80, right hemisphere 100.4
2117 Female, age 91, right hemisphere 99.9
1938 Female, age 85, left hemisphere 99.6
2686 Male, age 75, right hemisphere 92.9
1787 Male, age 76, left hemisphere 91.3
2613 Female, age 94, left hemisphere 89.4
Hippocampus, CA1
nTPM: 121.8
2749 Male, age 80, left hemisphere 191.5
1873 Female, age 85, both hemispheres 126.6
2527 Male, age 74, both hemispheres 110.6
2082 Female, age 91, right hemisphere 96.0
2045 Male, age 76, both hemispheres 84.2
Hippocampus, CA2
nTPM: 105.6
1963 Male, age 80, left hemisphere 153.4
2249 Male, age 74, both hemispheres 109.2
2113 Female, age 91, right hemisphere 99.0
1892 Male, age 76, both hemispheres 98.6
2437 Female, age 94, left hemisphere 91.4
1940 Female, age 85, left hemisphere 81.9
Hippocampus, CA3
nTPM: 96.6
2436 Male, age 74, both hemispheres 115.0
2137 Male, age 80, left hemisphere 111.0
2861 Female, age 67, both hemispheres 94.6
1891 Female, age 85, both hemispheres 91.3
1867 Male, age 76, both hemispheres 86.7
2620 Female, age 94, left hemisphere 81.2
Parahippocampal cortex
nTPM: 97.9
1850 Male, age 80, both hemispheres 105.7
2250 Female, age 67, right hemisphere 103.6
2622 Female, age 67, right hemisphere 102.1
1933 Female, age 85, both hemispheres 101.1
2692 Male, age 74, both hemispheres 99.4
2245 Female, age 91, both hemispheres 96.6
2018 Male, age 76, both hemispheres 96.3
1990 Female, age 91, right hemisphere 94.5
2532 Female, age 72, left hemisphere 90.1
2693 Female, age 94, both hemispheres 89.7
Perirhinal gyrus
nTPM: 99.1
1847 Female, age 91, left hemisphere 107.6
1841 Female, age 85, right hemisphere 105.6
1794 Male, age 80, right hemisphere 98.5
2848 Male, age 76, right hemisphere 92.7
2521 Female, age 94, right hemisphere 91.4
Subiculum
nTPM: 94.8
2619 Male, age 74, both hemispheres 104.0
2729 Female, age 91, right hemisphere 98.6
1977 Female, age 85, both hemispheres 93.6
1901 Male, age 80, both hemispheres 92.2
2042 Male, age 76, both hemispheres 91.4
2438 Female, age 94, left hemisphere 88.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 120.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 120.0
Samples: 197

Max nTPM: 236.1
Min nTPM: 37.7
Std nTPM: 39.4
Median nTPM: 115.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 236.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 235.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 228.1
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 217.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 216.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 208.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 199.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 195.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 195.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 193.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 191.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 207.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 207.9
FF:10169-103B7 60 years, female 264.7
FF:10153-102I9 76 years, female 151.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.2
Samples: 4

Max nTPM: 76.4
Min nTPM: 47.8
Sample A Female 76.4
Sample B Female 51.3
Sample C Male 49.4
Sample D Male 47.8
Entorhinal cortex
nTPM: 37.8
Samples: 4

Max nTPM: 45.5
Min nTPM: 31.9
Sample A Female 35.8
Sample B Female 45.5
Sample C Male 38.0
Sample D Male 31.9
Subiculum
nTPM: 42.6
Samples: 4

Max nTPM: 48.9
Min nTPM: 36.7
Sample A Female 48.9
Sample B Female 43.2
Sample C Male 41.7
Sample D Male 36.7
Ventral hippocampus
nTPM: 48.1
Samples: 4

Max nTPM: 54.0
Min nTPM: 37.1
Sample A Female 54.0
Sample B Female 37.1
Sample C Male 49.7
Sample D Male 51.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 186.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 171.5
Samples: 4

Max nTPM: 196.8
Min nTPM: 149.6
Sample A Male 166.0
Sample B Male 149.6
Sample C Female 196.8
Sample D Female 173.7
Hippocampal formation
nTPM: 186.7
Samples: 4

Max nTPM: 199.2
Min nTPM: 174.7
Sample A Male 199.2
Sample B Male 186.2
Sample C Female 174.7
Sample D Female 186.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69015284 Antisense, RP_050310_02_F07, Mouse strain C57BL/6J (56 days, male) 4.6
70436739 Antisense, RP_050310_02_F07, Mouse strain C57BL/6J (56 days, male) 2.4

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