HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.2 nTPM
HPA:54.2 nTPM
GTEx:65.4 nTPM
FANTOM5:162.1 Scaled Tags Per Million
Pig:47.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004902Antibody CAB001973
Glial cells MediumNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.2
Sample id Sample description nTPM
Hippocampus
nTPM: 52.4
1898 Male, age 80, left hemisphere 54.8
1911 Female, age 85, right hemisphere 53.2
2529 Female, age 94, left hemisphere 53.2
1855 Male, age 76, left hemisphere 51.9
2621 Female, age 67, right hemisphere 50.8
2148 Female, age 91, left hemisphere 50.4
Dentate gyrus
nTPM: 53.1
2010 Male, age 76, both hemispheres 55.0
2246 Female, age 85, both hemispheres 54.2
2530 Female, age 94, left hemisphere 53.8
1927 Female, age 91, both hemispheres 53.1
2528 Male, age 74, both hemispheres 51.4
2531 Female, age 67, both hemispheres 51.3
Entorhinal gyrus
nTPM: 52.1
2117 Female, age 91, right hemisphere 53.4
1787 Male, age 76, left hemisphere 53.0
1938 Female, age 85, left hemisphere 52.1
2613 Female, age 94, left hemisphere 51.4
2764 Male, age 80, right hemisphere 51.4
2686 Male, age 75, right hemisphere 51.1
Hippocampus, CA1
nTPM: 54.2
2749 Male, age 80, left hemisphere 59.3
2045 Male, age 76, both hemispheres 53.3
2527 Male, age 74, both hemispheres 53.1
1873 Female, age 85, both hemispheres 52.8
2082 Female, age 91, right hemisphere 52.4
Hippocampus, CA2
nTPM: 53.2
1892 Male, age 76, both hemispheres 54.4
1963 Male, age 80, left hemisphere 53.7
2249 Male, age 74, both hemispheres 53.6
1940 Female, age 85, left hemisphere 53.3
2113 Female, age 91, right hemisphere 52.5
2437 Female, age 94, left hemisphere 51.6
Hippocampus, CA3
nTPM: 53.3
2137 Male, age 80, left hemisphere 58.7
1867 Male, age 76, both hemispheres 55.3
1891 Female, age 85, both hemispheres 52.7
2436 Male, age 74, both hemispheres 51.6
2620 Female, age 94, left hemisphere 51.3
2861 Female, age 67, both hemispheres 50.2
Parahippocampal cortex
nTPM: 52.9
2250 Female, age 67, right hemisphere 55.6
2018 Male, age 76, both hemispheres 54.3
1933 Female, age 85, both hemispheres 53.9
2532 Female, age 72, left hemisphere 53.6
2245 Female, age 91, both hemispheres 53.0
1990 Female, age 91, right hemisphere 52.8
1850 Male, age 80, both hemispheres 52.5
2693 Female, age 94, both hemispheres 51.9
2692 Male, age 74, both hemispheres 51.4
2622 Female, age 67, right hemisphere 49.7
Perirhinal gyrus
nTPM: 53.3
1841 Female, age 85, right hemisphere 55.3
2521 Female, age 94, right hemisphere 54.3
2848 Male, age 76, right hemisphere 52.9
1794 Male, age 80, right hemisphere 52.2
1847 Female, age 91, left hemisphere 52.1
Subiculum
nTPM: 53.5
1977 Female, age 85, both hemispheres 55.4
2438 Female, age 94, left hemisphere 54.7
2042 Male, age 76, both hemispheres 54.6
1901 Male, age 80, both hemispheres 54.4
2729 Female, age 91, right hemisphere 51.7
2619 Male, age 74, both hemispheres 50.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.4
Samples: 197

Max nTPM: 132.9
Min nTPM: 45.4
Std nTPM: 11.8
Median nTPM: 62.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 132.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 116.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 111.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 104.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 97.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 96.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 96.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 91.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 86.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 86.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 85.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 162.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 162.1
FF:10169-103B7 60 years, female 192.5
FF:10153-102I9 76 years, female 131.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 54.5
Min nTPM: 40.9
Sample A Female 54.5
Sample B Female 46.7
Sample C Male 49.1
Sample D Male 40.9
Entorhinal cortex
nTPM: 41.6
Samples: 4

Max nTPM: 43.6
Min nTPM: 38.2
Sample A Female 43.6
Sample B Female 43.4
Sample C Male 41.3
Sample D Male 38.2
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 54.6
Min nTPM: 41.2
Sample A Female 54.6
Sample B Female 41.2
Sample C Male 44.0
Sample D Male 44.3
Ventral hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 45.9
Min nTPM: 38.8
Sample A Female 45.9
Sample B Female 39.1
Sample C Male 38.8
Sample D Male 43.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.