HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.1 nTPM
HPA:16.1 nTPM
GTEx:9.1 nTPM
FANTOM5:49.3 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:7.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
2148 Female, age 91, left hemisphere 18.3
1898 Male, age 80, left hemisphere 17.0
2529 Female, age 94, left hemisphere 15.3
1855 Male, age 76, left hemisphere 14.4
1911 Female, age 85, right hemisphere 14.3
2621 Female, age 67, right hemisphere 11.3
Dentate gyrus
nTPM: 14.5
2528 Male, age 74, both hemispheres 21.2
2530 Female, age 94, left hemisphere 17.8
2010 Male, age 76, both hemispheres 15.4
1927 Female, age 91, both hemispheres 11.2
2531 Female, age 67, both hemispheres 10.7
2246 Female, age 85, both hemispheres 10.6
Entorhinal gyrus
nTPM: 12.3
2117 Female, age 91, right hemisphere 21.6
1787 Male, age 76, left hemisphere 11.1
2764 Male, age 80, right hemisphere 10.8
1938 Female, age 85, left hemisphere 10.7
2686 Male, age 75, right hemisphere 10.3
2613 Female, age 94, left hemisphere 9.1
Hippocampus, CA1
nTPM: 12.8
2527 Male, age 74, both hemispheres 16.1
2082 Female, age 91, right hemisphere 15.8
1873 Female, age 85, both hemispheres 13.8
2045 Male, age 76, both hemispheres 10.4
2749 Male, age 80, left hemisphere 7.8
Hippocampus, CA2
nTPM: 16.1
2249 Male, age 74, both hemispheres 25.3
1940 Female, age 85, left hemisphere 16.9
2437 Female, age 94, left hemisphere 16.1
2113 Female, age 91, right hemisphere 15.8
1963 Male, age 80, left hemisphere 14.5
1892 Male, age 76, both hemispheres 7.8
Hippocampus, CA3
nTPM: 11.5
2620 Female, age 94, left hemisphere 14.6
2436 Male, age 74, both hemispheres 13.1
1891 Female, age 85, both hemispheres 13.0
2861 Female, age 67, both hemispheres 11.3
1867 Male, age 76, both hemispheres 8.7
2137 Male, age 80, left hemisphere 8.1
Parahippocampal cortex
nTPM: 9.8
2018 Male, age 76, both hemispheres 13.3
2692 Male, age 74, both hemispheres 12.7
2250 Female, age 67, right hemisphere 11.7
1990 Female, age 91, right hemisphere 10.2
2245 Female, age 91, both hemispheres 9.9
1933 Female, age 85, both hemispheres 9.3
1850 Male, age 80, both hemispheres 8.8
2622 Female, age 67, right hemisphere 8.1
2693 Female, age 94, both hemispheres 7.6
2532 Female, age 72, left hemisphere 6.1
Perirhinal gyrus
nTPM: 7.8
1794 Male, age 80, right hemisphere 9.2
2521 Female, age 94, right hemisphere 9.0
1847 Female, age 91, left hemisphere 8.8
1841 Female, age 85, right hemisphere 7.0
2848 Male, age 76, right hemisphere 5.2
Subiculum
nTPM: 14.0
2729 Female, age 91, right hemisphere 21.4
2042 Male, age 76, both hemispheres 16.8
2619 Male, age 74, both hemispheres 15.4
1901 Male, age 80, both hemispheres 13.1
1977 Female, age 85, both hemispheres 11.2
2438 Female, age 94, left hemisphere 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.1
Samples: 197

Max nTPM: 43.1
Min nTPM: 1.4
Std nTPM: 4.4
Median nTPM: 8.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 43.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 25.6
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 20.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 19.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 19.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 19.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 17.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 16.7
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 16.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 15.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 15.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.3
FF:10153-102I9 76 years, female 75.5
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 13.3
Min nTPM: 8.3
Sample A Female 12.7
Sample B Female 9.8
Sample C Male 13.3
Sample D Male 8.3
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 8.9
Min nTPM: 4.7
Sample A Female 7.6
Sample B Female 7.9
Sample C Male 8.9
Sample D Male 4.7
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 11.5
Min nTPM: 10.9
Sample A Female 11.2
Sample B Female 11.5
Sample C Male 10.9
Sample D Male 11.2
Ventral hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.7
Sample A Female 11.9
Sample B Female 11.3
Sample C Male 11.3
Sample D Male 8.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.5
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.4
Sample A Male 7.2
Sample B Male 5.4
Sample C Female 7.1
Sample D Female 6.3
Hippocampal formation
nTPM: 7.1
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.1
Sample A Male 7.1
Sample B Male 6.1
Sample C Female 7.9
Sample D Female 7.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
671249 Antisense, RP_040914_02_B07, Mouse strain C57BL/6J (56 days, male) 0.0

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